Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03388 atgTTTCTGCTTGATTCGGGACTCTACGAGAGCAATGAAGAAGCTGCCACCAGGAGAGAGGTTCTTCAGCGCCTTGATCAGACTGTTAAAAGCTGGGTGAAGCAGTTGACGCGTCAACGAGGCTATACGGATCAGATGGTTGAGGATGCCAATGCCGTTATTTTCACTTTCGGTTCTTATCGACTAGGGGTACATGGACCAGGAGCTGACATAGACACTTTGTGTGTTGGCCCTTCTTATGTGAATCGGGAGGAAGACTTCTTTATCATTCTGCATAACATCTTGGCTGAAATGGAAGAAGTTACTGAACTTCAACCAGTTCCAGATGCTCATGTCCCCGTAATGAAATTCAAGTTCCAGGGAATATCTATAGATTTGCTTTATGCAAGTATATCTCTTTTGGTTGTGCCTGAAGACCTGGACATCTCACATGGCTCAGTGCTGTATGATGTTGATGAACCTACTGTTCGAAGTCTTAATGGCTGCCGGGTGGCAGATCAAATTCTTAAACTTGTTCCAAATGTTGAGCACTTCCGAACCACACTGAGATGTTTAAAGTTTTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTTACGGGATTCCTTGGAGGCGTGAATTGGGCTCTATTAGTTGCTCGAATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGCTGGTTTCTCGATTCTTTAGGGTATATACACAATGGAGGTGGCCAAATCCTGTCATGCTGTGCACAATAGAGGAGAATGAACTGGGTTTCCCAGTTTGGGATCCTCGTAGAAACCCGCGGGACAGATATCACATTATGCCAATTATTACTCCTGCATACCCTTGCATGAATTCCAGCTACAATGTCTCCGCAAGCACTCTTCGTGTTATGAAGGAACAGTTTCGCTATGGCAACAAGATTTGTGATGAAATTGAGCTCAATAAAGCCCAATGGAGTGCACTTTTTCAGCCATATTTCTTTTTCGAAGCCTACAAAAACTATTTACAAGTGGACATCCTTGCAGCAGACAATGATGACTTGTTAGCATGGAAAGGTTGGGTAGAATCTCGATTGAGGCAGCTCACCCTGAAGATAGAGCGGGATACAAATGGGATGTTGCAGTGTCATCCTTACCCACATGAGTATGCAGACACATCCAGACATTGTGCTCATTCTGCATTTTTCATGGGCTTGCAAAGAAAAGAGGGAGAAAAAGGTCAAGAGGGACAACAATTTGATATACGTGGAACGGTTGATGAATTCAGGCAAGAAATAAATATGTATATGTACTGGAAGCCAGGGATGGAAATTTTTGTTTCCCATGTACGTCGAAAGCAGCTCCCTTTATTTGTATTTCCAGATGGTTACAAACGCAATCGGATGTCAAGGCACATAAGCCATTCAGCTGAAAAAATGGGTGAGGATGCCGCAAAGTCCAACCTAGGGTCTTCTGAAAGAAGTGTCAAGAGGAAAAATGACCATGAAATGTTGGATGAGAAGCTAGGCAAACCAGAGAAGAGGGCCTCTATCAGCCCGCAGAGGCTAGTGTGTGTCTCTCCAGAAAGTTGTTCATCTCAAATGAGTATTGATGGTACCAAAGGGGTTAGGTTAGCCAAGAATGCTGGCACCAAATGCGAAATTAAGTCATCTAATGGACTCCTAGAAAATGGAATAAGTACTGAAGGAGCTTACATGCATATTAGTGAAACAGGTGGTGTTCATCCCAAAAATGATAGTCAGAACTCAAGGTGTTCAGAAGTTCAGAATGAGGTAAGCTTGCTGAATCACTGGAGCAAACCGTCCTGGGAATGTTGTTTGGTTCGTTGCAAGTTCCTTAATAGAAGTTGGTAA 1845 0.4331 MFLLDSGLYESNEEAATRREVLQRLDQTVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHNILAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCTIEENELGFPVWDPRRNPRDRYHIMPIITPAYPCMNSSYNVSASTLRVMKEQFRYGNKICDEIELNKAQWSALFQPYFFFEAYKNYLQVDILAADNDDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSRHCAHSAFFMGLQRKEGEKGQEGQQFDIRGTVDEFRQEINMYMYWKPGMEIFVSHVRRKQLPLFVFPDGYKRNRMSRHISHSAEKMGEDAAKSNLGSSERSVKRKNDHEMLDEKLGKPEKRASISPQRLVCVSPESCSSQMSIDGTKGVRLAKNAGTKCEIKSSNGLLENGISTEGAYMHISETGGVHPKNDSQNSRCSEVQNEVSLLNHWSKPSWECCLVRCKFLNRSW 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03388 614 PIRSF PolyA_polymerase 2 561 IPR014492 GO:0004652|GO:0005634|GO:0043631
Aip07g03388 614 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 325 450 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aip07g03388 614 PANTHER POLY A POLYMERASE 2 524 - -
Aip07g03388 614 Pfam Nucleotidyltransferase domain 51 127 IPR002934 GO:0016779
Aip07g03388 614 SUPERFAMILY PAP/OAS1 substrate-binding domain 173 322 - -
Aip07g03388 614 Gene3D - 3 320 - -
Aip07g03388 614 CDD NT_PAP_TUTase 18 172 - -
Aip07g03388 614 Gene3D Beta Polymerase, domain 2 10 166 IPR043519 -
Aip07g03388 614 Gene3D Poly(A) polymerase predicted RNA binding domain 325 440 - -
Aip07g03388 614 PANTHER NUCLEAR POLY(A) POLYMERASE 4 2 524 - -
Aip07g03388 614 Pfam Poly(A) polymerase predicted RNA binding domain 325 385 IPR007010 GO:0003723|GO:0043631
Aip07g03388 614 Pfam Poly(A) polymerase predicted RNA binding domain 385 457 IPR007010 GO:0003723|GO:0043631
Aip07g03388 614 SUPERFAMILY Nucleotidyltransferase 3 171 IPR043519 -
Aip07g03388 614 Pfam Poly(A) polymerase central domain 3 321 IPR007012 GO:0004652|GO:0043631
Aip07g03388 614 MobiDBLite consensus disorder prediction 482 505 - -
Aip07g03388 614 MobiDBLite consensus disorder prediction 466 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03388 Aip-Chr7 123585972 123591983 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03388 K14376 - gmx:100802620 1016.91