Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03316 ATGGAAGACACTGAGCAGAAACAAATGTTCCGCGACATCGTGCTCCAAGTCGTCATGGTCCTCTTCTTTGTAGTCACGTTCCTGGCCATGCACGGCATCCCTCAGAGGTTCCTCGCCTGGCTCCGCCTCCCAAGGGGACGCTCCGTCCGAGCCAAGCGCCACTTCGTCCGCAGCGCTCAGCTCCTCGCTGAAGCCCGAACCGCCAAGAAGAGCCGATCCTCCAGCTTGAATTCGCTCGCAAACGAAGCCCTAACCGAAGCAGATCGAGCGATCGCGCTCAATCCAAGGGATGCAGCTTCGTACCTACTCAAAGCAATGATCCTCGATCTGCAAGGGTTCCGGACCTCGGCGCTCGATGCAGTCGACGCGGCGCTGTCGCCGCTGGCAGCAAAGTCGCTCGCCGCGGAGGAGAGGGGTGACGCGCTGGTTAAGCGAGCGGAGCTGAAGTTGGCAGTGAGCGAGCGAGGCGAAAGCCGAGTTGACTCGGCGGTTGCCGATTTGACCGAGTCGGTGAAGCTGAACCCGAAGAACGCGAGAGGATGGTGTCTGTTAGGGCAATGCTATGAGGAGAAGGAAATGGAGGACGAAGCGAAGAAGGCTTATAAAGAGGCTCTTGAATTGGAACCGAAGCTTAGTGTGGCTGAGGAAGCGCTCAAGAGATCAGATGAAGAATGA 675 0.5793 MEDTEQKQMFRDIVLQVVMVLFFVVTFLAMHGIPQRFLAWLRLPRGRSVRAKRHFVRSAQLLAEARTAKKSRSSSLNSLANEALTEADRAIALNPRDAASYLLKAMILDLQGFRTSALDAVDAALSPLAAKSLAAEERGDALVKRAELKLAVSERGESRVDSAVADLTESVKLNPKNARGWCLLGQCYEEKEMEDEAKKAYKEALELEPKLSVAEEALKRSDEE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03316 224 Pfam Tetratricopeptide repeat 178 210 IPR001440 GO:0005515
Aip07g03316 224 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 8 221 - -
Aip07g03316 224 ProSiteProfiles TPR repeat profile. 178 211 IPR019734 GO:0005515
Aip07g03316 224 SUPERFAMILY TPR-like 81 214 IPR011990 GO:0005515
Aip07g03316 224 Gene3D Tetratricopeptide repeat domain 140 224 IPR011990 GO:0005515
Aip07g03316 224 SMART tpr_5 178 211 IPR019734 GO:0005515
Aip07g03316 224 SMART tpr_5 144 177 IPR019734 GO:0005515
Aip07g03316 224 PANTHER - 8 221 - -
Aip07g03316 224 Gene3D Tetratricopeptide repeat domain 31 139 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03316 Aip-Chr7 122331173 122332298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03316 - - gmx:100799725 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03316 07 122331173 122332298 Aip07g03316 07 122331173 122332298 ECH