Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03291 ATGCGCTACACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTTTGGTGCTGTTGCTGCTGCTGATTTGTCTTGTTTTTCCGGCGATCGGATTCTTTTATGTCCGCCGTAAATGGCGGATTTCAGTGGCTAGGAAGGAAGAGATCAGGAGGCTTCTGATTTTGGCTGCTGAGGAAACTGCCAGGGCCGAGAGAGAGTCCACGTATGGTTACGGTGCCGCGGTGGAAACCGCCGTCAAGAGCAATCAGTGTGCCGTGTGCTTTGTTCCCGCCACCGCACGCTGCGCTCAGTGCAAATCGGTTCGCTACTGTTCGTTTGAGTGTCAAACTCTTCATTGGCGCCAAGGGCACAAATTGGAATGCCGTCTGCAAAGAATCCTTCGGCAGAGTGATGTAGTTAGTGATCTTGGCAACAAGGCAACCGAGCAAGAATTCTCTAGAATCGCTGACCAGAAGTCTGAAATTGCAGGTGCAGAGCATGAAGCGTCCAGTGAAAACCAACAAACTTCAGTCGCTGGTGTTTCTTCTAAAGTTTTATATGGAAAAAATGAAAATGTAAGAGATGAGTGCCTTGCAGGGGGAACTATAACAGATTCTAATTCTGAGTTGTCAAGTAACTCTTTTTCTGGCTTCTCAGCTTCTCCAAGTGCTAGTGAATCATCTGATGACTCCTCTATTTGTGAGAGTGTTATATCAAACGAGCATGACCAATCTGATGGACCGATTTTTGTTGATTCAACACTTGACGTTCCAGATAGCACTTCAAGTGACAGTAGCATGGTTGTAGCTATGTCTTCATCACCCAAATTTGCCAGTTTGGTTGAATCAGTTGATGGTTTTTCGACAATGCGTAAATTAAATGAAAGTAGATCTGGTCTTTGTAAAGAAGAAGGAAAACTTGCAAAAAATGGTACTTCAGGTTCAGGTATGCTGAAGGGGGCAACAATCAAGCCTTCCATAGTGTCTTCCGGGTTCTGGGATAGAACTCTTGGCACAACTGGGATTGAAGAAGATGTCAACAGTGACACTTCTCCATCCCATTCGGATGAATCCACTCACAATACAGGATCTGATTCTCAGTCATTTCGCTTTTCGTTTAGTTCCATCGCTCTTATGCAAGCGCAAGATAGTGAGGCAAAGAATTTTGTATCTGATAATGCTTCTCCCAATACTGTTGGGGACAATGTGCCTTGCTCAGGATCAGCATCAACGGAGAATGACAGAGATACAGTGAATTCTTCAAAGGCTACAAATCTTAAATTCATGAACAGCAAAGATTCCATACTTCCAAACCCTGCTGCTGCCCCTGTTTATGAATCTGATCAATTGGAATCTAAAGGCAGCTCTGTGCAACCCTTATCTTGTCTCTACCCACCATCCCCCAGTCCTAGCAAAGGTTCAGGTTGTGCAGATTCTTTGAACGTCCATAACTTGCAATCGTATATTTCTATGGCATCAAATCGTGTTGTAGGAAACCATGGCATCAATTCTAAGTCTGCTGAAATTAGATGCCTGACACGTGACCTTGATTCTAATTTAGTCTGTAGAACTGATGCTCACTCAAATTCCAGTACAAAACATGTGAATAATGGTAATCAATCTGCCACTAGTACGTCGTCTGGGGGTGTTAGCTGTTCTGCAAATTCTAAGAGTGGCTTGAAATCATCTGTTTTAAAAGTTGTTGATCAGTTCCGAGGATCAAATTTCTCAAAGCAGTTTCCACTAGTTTGGAATGATACCGCAGGAAAACAAAGTGATAAGGGTCTTTTTCCTTATGAATTGTTTGTCAAGATTTATAACTCGAACAAGGGGGAGTTTAGCCCATTTGGTCTTATAAATTGTGGGAACAGCTGTTATGCCAATGCTGTACTCCAGTGCTTAGTATTTACACCACCCCTGACTGCATATTTTCTTCAAGGACTACATTCTACAGCATGTGCAAATAAAAAATGTTTCAACTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAGGATACAAAATATCCACTCTCTCCTAAGGGCATACTCTCCCAACTAAGGAGAACTGGAAGTCAACTTGGTAATGGCAAAGAAGAAGATGCACATGAATTTCTAAGGCATGCCATTGACACAATGCAATCTGTTTGCCTTATGGATGCTGGGGTTGATGTATGTGGTTCATTGGAAGAGGACACTACTTTAATTGGTCTAACATTTGGGGGTTACCTTAGATCAAAGATAAAATGCATGAAATGTGGAGGAAAATCTGAACGTCAGGAAAGGATGATGGATCTTACCGTTGAGATAGAAGGGGACATAGCAACCCTGCAGGAAGCTCTTCGACGATTTACAAGTACCGAGTCTTTGGATGGAGAAAATAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACCATTTCTGAGGCACCTAATGTTCTTACAATTGCATTAAAGAGATTTCAGTCAGGAAAGTTTGGGAAGCTTAACAAGCCTATCCAGTTTCCTAAAACTCTTGACTTGGCTCCTTTCATGAGTGGGACTAGTGATAAATCACCTATATACAGACTGTATGGTGTAGTTGTTCACTTGGATATCATGAATGCTGCCTTTTCTGGTCACTATGTGAGCTATGTGAAGAATAGTCAAAACAAGTGGTTCAAGGTTGATGACAGTGTGGTGACACCTGTTGAGGTGGAGAGAGTCTTAACAAAAGGATCATATATGCTTTTTTATGCAAGGTGTTCACCCAAGGCCCCAAGATCAATCAGAGGCAAGACATTGTCCCCAGAATCAAAAGGCAAATTTCACCACCTGAAGAGAGTTTTAGAAGATGACTCGTCAAGTGACAATTCATCGCTAATCAGCAGCAATTCCGACTTAGGTTCTTGCAGCACCGATAGCACTCATGATTCGACTACCACAGATGAGTTCTCCAATTATATTTTCGGTGATTCAAGGGTCGGCTGGGGTAGCCCATGGAGGAACTCCGAATCCGACACCTCATCCTCCACCTCTTCCTCATCTTCTCCCCTGAACTTCAGGCATTCACCCCTAGCCGATGTGGACCGATATGATTCAGTTTCTCATGGTTCAAGTGCAGATATAGATGGCAATTTGTACAGGAACAAAATGGGGCATGCAGAAAGAAAAGGAGGTGTTGTGCCTCTCTCACATTCAGACACTCTACACCATAGGAAGTTAGAAAGTACTAGGATTAGCAGCAACAGTAATTTTAGGGATACTAACTCTCATCAGAGACTAGGATCTAACCATTTTAATGGCATAAGCTCTGGTGCACCTTGTAGAAAACCAAGGGACAGAACGGATTGA 3324 0.429 MRYTGDLGFSSLVLLVLLLLLICLVFPAIGFFYVRRKWRISVARKEEIRRLLILAAEETARAERESTYGYGAAVETAVKSNQCAVCFVPATARCAQCKSVRYCSFECQTLHWRQGHKLECRLQRILRQSDVVSDLGNKATEQEFSRIADQKSEIAGAEHEASSENQQTSVAGVSSKVLYGKNENVRDECLAGGTITDSNSELSSNSFSGFSASPSASESSDDSSICESVISNEHDQSDGPIFVDSTLDVPDSTSSDSSMVVAMSSSPKFASLVESVDGFSTMRKLNESRSGLCKEEGKLAKNGTSGSGMLKGATIKPSIVSSGFWDRTLGTTGIEEDVNSDTSPSHSDESTHNTGSDSQSFRFSFSSIALMQAQDSEAKNFVSDNASPNTVGDNVPCSGSASTENDRDTVNSSKATNLKFMNSKDSILPNPAAAPVYESDQLESKGSSVQPLSCLYPPSPSPSKGSGCADSLNVHNLQSYISMASNRVVGNHGINSKSAEIRCLTRDLDSNLVCRTDAHSNSSTKHVNNGNQSATSTSSGGVSCSANSKSGLKSSVLKVVDQFRGSNFSKQFPLVWNDTAGKQSDKGLFPYELFVKIYNSNKGEFSPFGLINCGNSCYANAVLQCLVFTPPLTAYFLQGLHSTACANKKCFNCEFESLILKSKDTKYPLSPKGILSQLRRTGSQLGNGKEEDAHEFLRHAIDTMQSVCLMDAGVDVCGSLEEDTTLIGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGDIATLQEALRRFTSTESLDGENKYHCVRCKSYEKAKKKLTISEAPNVLTIALKRFQSGKFGKLNKPIQFPKTLDLAPFMSGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVSYVKNSQNKWFKVDDSVVTPVEVERVLTKGSYMLFYARCSPKAPRSIRGKTLSPESKGKFHHLKRVLEDDSSSDNSSLISSNSDLGSCSTDSTHDSTTTDEFSNYIFGDSRVGWGSPWRNSESDTSSSTSSSSSPLNFRHSPLADVDRYDSVSHGSSADIDGNLYRNKMGHAERKGGVVPLSHSDTLHHRKLESTRISSNSNFRDTNSHQRLGSNHFNGISSGAPCRKPRDRTD 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03291 1107 Coils Coil 45 65 - -
Aip07g03291 1107 Pfam Ubiquitin carboxyl-terminal hydrolase 608 909 IPR001394 GO:0004843|GO:0016579
Aip07g03291 1107 MobiDBLite consensus disorder prediction 1069 1094 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 379 411 - -
Aip07g03291 1107 Pfam MYND finger 83 120 IPR002893 -
Aip07g03291 1107 Gene3D - 72 122 - -
Aip07g03291 1107 ProSiteProfiles Zinc finger MYND-type profile. 83 120 IPR002893 -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 200 239 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 939 970 - -
Aip07g03291 1107 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 932 1087 - -
Aip07g03291 1107 Gene3D Cysteine proteinases 601 922 - -
Aip07g03291 1107 ProSitePatterns Zinc finger MYND-type signature. 83 120 IPR002893 -
Aip07g03291 1107 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25 931 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 334 358 - -
Aip07g03291 1107 SUPERFAMILY Cysteine proteinases 606 914 IPR038765 -
Aip07g03291 1107 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 932 1087 - -
Aip07g03291 1107 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 25 931 - -
Aip07g03291 1107 Coils Coil 147 167 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 200 259 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 945 970 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 991 1012 - -
Aip07g03291 1107 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 608 912 IPR028889 -
Aip07g03291 1107 SUPERFAMILY HIT/MYND zinc finger-like 78 123 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 519 542 - -
Aip07g03291 1107 MobiDBLite consensus disorder prediction 1065 1107 - -
Aip07g03291 1107 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 609 624 IPR018200 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03291 Aip-Chr7 121827618 121833449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03291 588 930 Miscellaneous Gene Families AT4G31670 48.696 1.11e-113 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03291 K11855 - gmx:100793079 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03291 07 121827618 121833449 Aip07g03291 07 121827618 121833449 ECH