Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03290 ATGGGCCTCAAGTGCGCCACCTTAATCCTCTTTTTTACAATGTTTGTGGCAAGTAGCATTGCCATTGACCCATGCACCTCCAAGCCTGACGAAGCGGGCCTAACCGTGATACCCATCTTCGGCAAATGCTCACCATTTGACCCACCCAAGCCCGACTCATGGGCCCAAACGGTCATAAACATGGCATCCAAAGACCCAGCCCGTCTCAAGTACTTGTCCACACTAGTAGGCCAAAAGTCCGTTGTCTCCGCCCCAATCGCTTCGGGCCAGGCCTTCAACATTGGAAACTACGTGGTCCGTGTCAAGATCGGAACCCCGGGCCAGCTCATGTTCATGGTCTTGGACACCAGCACTGACGAGGCCTTCGTCCCGTGCTCTGGTTGCGTGGGCTGCTCCGCCACCACATTCTCCCCCAAAGACTCCACAAGTTACGGCCCATTGGACTGCTCAGTCCCGCAATGTGGCCAGGTCCGTGGGCTTCAGTGTCCCTCCACGGGCGCAGGCGCGTGTGCTTTCAACCAATCCTACGCGGGCTCCACATTTTCCGCCACGCTCGTCCAAGATTCACTCAGATTAGCCAGTGACGTAGTCCCGGGCTACTCATTCGGCTGCGTTAACGCAATCTCCGGCGAGTCCATTCCGGCCCAAGGGCTTCTGGGCCTGGGCCGTGGGCCTTTGTCTTTACTTTCGCAATCCGGCGGGCTCTACTCAGGTGTCTTCTCCTACTGCCTTCCCAGCTTCAAATCGTACTACTTCTCAGGGTCGCTCAAGCTTGGGCCCGTGGGGCAGCCCAAGAGTATCCGTACAACCCCACTTCTCCGAAACCCTCACAGGCCTTCCCTCTACTATGTGAACCTCACCGGAATAAGCGTGGGAAAGGTTCTCGTCCCTGTCCCCTCAGAGTACCTGGCTTTCGACCCGAACACCGGTTCCGGAACCATCATTGATTCCGGAACGGTGATAACCCGGTTCGTTGAGCCGGTGTACAATGCGGTGAGAGACGAGTTCAGGAAGCAGGTTGGTGGAACGTTCTCGAGCCTGGGAGCGTTTGACACGTGTTTCGTGAAGACGTACGAGAACTTGGCGCCAACGGTGACGCTTCACTTCACGGGGTTGGACCTGAAGCTTCCATTGGAGAACAGCTTGATACATAGTAGCGCTGGGTCGCTAGCTTGCCTTGCAATGGCGGCGGCTCCGAGTAATGTGAACTCTGTGCTGAACGTGATTGCCAACTTGCAGCAACAGAATCTTAGGATCTTGTTTGATACAATTAATAACAAGGTTGGGATAGCCCGTGAGCTTTGTAACTAA 1311 0.5545 MGLKCATLILFFTMFVASSIAIDPCTSKPDEAGLTVIPIFGKCSPFDPPKPDSWAQTVINMASKDPARLKYLSTLVGQKSVVSAPIASGQAFNIGNYVVRVKIGTPGQLMFMVLDTSTDEAFVPCSGCVGCSATTFSPKDSTSYGPLDCSVPQCGQVRGLQCPSTGAGACAFNQSYAGSTFSATLVQDSLRLASDVVPGYSFGCVNAISGESIPAQGLLGLGRGPLSLLSQSGGLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGISVGKVLVPVPSEYLAFDPNTGSGTIIDSGTVITRFVEPVYNAVRDEFRKQVGGTFSSLGAFDTCFVKTYENLAPTVTLHFTGLDLKLPLENSLIHSSAGSLACLAMAAAPSNVNSVLNVIANLQQQNLRILFDTINNKVGIARELCN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03290 436 SUPERFAMILY Acid proteases 90 435 IPR021109 -
Aip07g03290 436 Gene3D Acid Proteases 74 259 IPR021109 -
Aip07g03290 436 Pfam Xylanase inhibitor N-terminal 97 259 IPR032861 -
Aip07g03290 436 ProSiteProfiles Peptidase family A1 domain profile. 97 431 IPR033121 -
Aip07g03290 436 PANTHER ASPARTYL PROTEASE-RELATED 6 436 IPR001461 GO:0004190|GO:0006508
Aip07g03290 436 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Aip07g03290 436 Gene3D Acid Proteases 260 436 IPR021109 -
Aip07g03290 436 PANTHER ASPARTYL PROTEASE AED3 6 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03290 Aip-Chr7 121776516 121777826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03290 80 436 Miscellaneous Gene Families AT1G77480 26.515 5.39e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03290 - - gmx:100816307 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03290 07 121776516 121777826 Aip07g03290 07 121776516 121777826 ECH