Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03287 ATGACCAACAAAAGTGCCGAATTGTCTCAGGGAACTACCGGGGCCGGGGCCACTATTCCCCTCCCTTCTACACCCCGGCCTCGGCCACCTGAGCATCAATTTCCACCGCGAGATAGCCAGCGAGAGGTGCAGCAAAATCGCGCCGGAAACACGAATACGATTTTCAAGAGTGGGCCACTTTTCATATCTTCTAAAGGAATTGGATGGACATCTTGGAAGAAAAGGTGGTTTATTTTGACACAAAATTCACTTGTTTTCTTCAGAAGTGATCCGAGTGCTGTCCCTCAGAAAGGAAGTGAAGTAAATTTGACTCTCGGTGGCATCGACCTAAACAATTCAGGCAGTGTCATTGTCAAAGCGGACAAGAAACTTTTGACAGTTCAATTTCCCGATGCTCATGATGGACGAGCATTCACACTTAAGGCCGAAACTACAGAAGATTTATATGAGTGGAAGACCGCACTTGAGAATGCTCTAGCACAAGCACCCAGTGCTAACAATATGATGGAGCAAAATGTGAAGGATAAGGAACCAGTTAAATCCATTGTCATTGGCCGACCGATTTTACTTGCTCTGGAGGATGTCGATGGAACTCCAACATTTTTGGAGAAAGCCCTGAGATTCATAGAAGAATATGGAGCCAATGTAGAAGGGATCTTGCGACAAGCAGCTGATGTTGAAGACGTTGAACGACGTGTTCGGGAATATGAACAAGGAAAAACTGAGTTTACTGCAAATGAGGATGCACATGTTATTGGTGATTGTGTCAAGCATGTGCTTCGGGAATTGCCATCATCTCCAGTTCCTGCATCTTGTTGCAAGGCACTGTTAGAAGCTGTTCGCACTGATCGTAGCAGAAGGGTTTCTGCTATGCGCATAGCCATAAATGACACATTCCCTGAACCAAATCGCCGCTTATTGCAAAGAATACTCATGATGATGCAAATTGTTGCTTCCCGCAAATCTGTGAATCGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCACCCTTGCTTCTTCGCCCCCTTCTAGCTGGAGAATGTGAGATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTATGCAATTATTACAAGCAGCTGCTGCAGCCAACCATGCTCAAGCAATTGTTATAACTCTATTAGAAGAATATAATAACATATTTGGGGCTGATGGTTGTGGTTCTCCTGGCCCTGATATATACTCTGACTCGGATGATTTGGAATCTGAGAGTGAAGAGGCTACTGATGAAGACTTGTCCTATGATGAAGAATATGACGATGAAGAAGATGAATCAGTTCAGGAGTCTGATGAAGATGCAGATGAAGTTGGTAGTGGATCCGACGGTGAGAATGGAGAGTCTGAGACCGATTATATATCTGAGAAGGATCCTGAACAATCTAATTCAAAAGCTCATGGTCTAGAAAATAAAGCAAAAAAGCATGGGGATACCAAAGGCAGCGAAAGTATCACAAGTCAAACTAATACTGCTGAAGCAGTTGGACAAGCTTCTGCTAACCCGAAAAAAGCGCATGATTCACCTTCTCCGACCCCATCTTACAAAAAATCTGCAACTATATCCAATAGTCCAGATTCTCGGCGCAACTGTTTGGGTCGTACCTCTGCAAGGAAGAACCTTTCCATGGAATCCATTGATTTCACTGTTGATGATGATGAGGAAGTCGAAAAGCTTGAATATACAAAGAAAGACTTACAAAACCAAATTGCAGAGGAGGTGATTAGACTACAGGAACAACTGGTCAAGGTGAAGAATGCTCGGGCAAATAATGAGATCAGGACAGAGCTCGGGGAATTAACTCTCATAGAAATGGATCTGGCTAACTTTGAGAACAAGGTTATTGAACTTGGGATGCGGCTTAATGTACAACTCGAGCGCAAAGCTCGATCTACTTTGACTCAACCGACATCAAACCATGAAAGAAAATCGAAGAGTAAGGTAGAGACTGAAGTTGTGCAGACATCACAATTTGAAAGGTCAACGAGCAAGGACACTCACCTCAGTAAAGCAGAGACTGTCAATGAGAGGAAGTCAGAGAGCAAACATCCACCTTCTGGTTTAAAGAAATCTGGTTCAAAGGGAGAGGTTCGCCGAAGTCAAGAACTACCGCGCAACCCCGATAGAGGAAAAGGATCCGAGCTAAACCAAACACATCCATCCCCTGTGCCAAACCAAGAGAAGCCTAGAGGGTTGGACAGTTCCCAGTCACTACAGATCCCGGAAAGAAGCAGCAGCAAAGTTGTTTTGTTATGCAATAAATTCCAGATATGTGTCTTAAGCAATCAGATTGGCGCAATAGTCCATGTTCATAGGAGAGAAGCAGAGTCCATTATAACTGAAAATGAAGGATGTGCAAGGCATAGTTCAACAGTCCCCCATTGA 2403 0.4407 MTNKSAELSQGTTGAGATIPLPSTPRPRPPEHQFPPRDSQREVQQNRAGNTNTIFKSGPLFISSKGIGWTSWKKRWFILTQNSLVFFRSDPSAVPQKGSEVNLTLGGIDLNNSGSVIVKADKKLLTVQFPDAHDGRAFTLKAETTEDLYEWKTALENALAQAPSANNMMEQNVKDKEPVKSIVIGRPILLALEDVDGTPTFLEKALRFIEEYGANVEGILRQAADVEDVERRVREYEQGKTEFTANEDAHVIGDCVKHVLRELPSSPVPASCCKALLEAVRTDRSRRVSAMRIAINDTFPEPNRRLLQRILMMMQIVASRKSVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSMQLLQAAAAANHAQAIVITLLEEYNNIFGADGCGSPGPDIYSDSDDLESESEEATDEDLSYDEEYDDEEDESVQESDEDADEVGSGSDGENGESETDYISEKDPEQSNSKAHGLENKAKKHGDTKGSESITSQTNTAEAVGQASANPKKAHDSPSPTPSYKKSATISNSPDSRRNCLGRTSARKNLSMESIDFTVDDDEEVEKLEYTKKDLQNQIAEEVIRLQEQLVKVKNARANNEIRTELGELTLIEMDLANFENKVIELGMRLNVQLERKARSTLTQPTSNHERKSKSKVETEVVQTSQFERSTSKDTHLSKAETVNERKSESKHPPSGLKKSGSKGEVRRSQELPRNPDRGKGSELNQTHPSPVPNQEKPRGLDSSQSLQIPERSSSKVVLLCNKFQICVLSNQIGAIVHVHRREAESIITENEGCARHSSTVPH 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03287 800 Coils Coil 226 246 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 1 52 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 669 715 - -
Aip07g03287 800 ProSiteProfiles Rho GTPase-activating proteins domain profile. 190 389 IPR000198 GO:0007165
Aip07g03287 800 MobiDBLite consensus disorder prediction 404 449 - -
Aip07g03287 800 SUPERFAMILY PH domain-like 51 172 - -
Aip07g03287 800 SMART RhoGAP_3 196 386 IPR000198 GO:0007165
Aip07g03287 800 CDD PH 56 155 - -
Aip07g03287 800 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 37 581 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 393 544 - -
Aip07g03287 800 ProSiteProfiles PH domain profile. 53 160 IPR001849 -
Aip07g03287 800 SMART PH_update 54 162 IPR001849 -
Aip07g03287 800 Coils Coil 562 593 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 636 746 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 717 746 - -
Aip07g03287 800 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 37 581 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 1 19 - -
Aip07g03287 800 MobiDBLite consensus disorder prediction 456 487 - -
Aip07g03287 800 CDD RhoGAP 199 337 - -
Aip07g03287 800 Pfam RhoGAP domain 199 342 IPR000198 GO:0007165
Aip07g03287 800 Pfam PH domain 56 159 IPR001849 -
Aip07g03287 800 Gene3D - 40 161 IPR011993 -
Aip07g03287 800 Gene3D Rho GTPase activation protein 166 391 IPR008936 GO:0007165
Aip07g03287 800 MobiDBLite consensus disorder prediction 488 544 - -
Aip07g03287 800 SUPERFAMILY GTPase activation domain, GAP 198 391 IPR008936 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03287 Aip-Chr7 121753497 121762236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03287 - - ahf:112706233 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03287 07 121753497 121762236 Aip07g03287 07 121753497 121762236 ECH