Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03276 ATGGACTCTGTTCCTTTCCACGATGGCAACATCCACCATATTCTCGAAACCCGATACCTTCACTCTCGCCAAGATGTTAATCATAGGTTGCAGACACACTCCTCGTTGATTCGCAGGCTTACTCAGGAGAGAGAGTTAGAGGGCCACCTTGGCTGTGTCAATGCTGTGGCTTGGAATTCCAGAGGCTCATTATTGATATCTGGATCAGATGATACACGGATCAATATTTGGAACTATGCTGATCGGAAACTTCTACATTCGATTGACACTGGTCATACTGCAAATATTTTCTGTACAAAGTTTATACCAGAAACTTCTGATGAGATTGTAGTCTCGGGAGCTGGAGATGCTGAAGTCCGATTATTTAATTTGTCTCACTTAAATGGATCTGCTGAAAATGCCATTGCTCCATCAGCACTTTACCAATGCCACACAAGGAGAGTCAAGAAGTTGGCTGTTGAAAATGGAAACCCTAACATGGTATGGAGTGCTAGTGAAGATGGGACCTTGAGGCAGCATGATTTTCGAGAGGGAACATCTTGTCCGCCAGCAGGATCTTCGCACCAAGAGTGTAGAAGTGTTCTACTCGACTTACGGAGTGGAGCCAAAAGGTCACTTGCTGATCCTCCTAAACAAGTTCTAGCCCTAAAATCTTGTGATATCAGCTCAACTAGACCACATCTGCTCCTTGTTGGAGGAAGTGATGCTTTTGCTCGCTTGTATGATCGGAGGATGCTACCACCTTTGAGCTCCTGTCGGAAAAGAATGTCACCACCACCTTGTGTCAATTATTTCTGTCCAATGCATCTTTCTGATCGTGGACATCCAAGCTTGCACTTAACTCATGTTACATTTGGTCCTGATGGAGATGAGGTTCTCCTTAGCTATAGTGGAGAGCATGTTTACTTGATGAATGTTAATCATGCTGGATTGAATGACATGCAATATACTTCAGGAGATGTATCAAAACTAATGACATATTCTCCAACAATTAATGGAATGGAATTGCAACCTTCTATATCCAGTGTTTTCCCAAATGGATTTTCAATAAAAAAGAATGTTGCTGCAAAGATTGACTACTGCAGGAAACTAATAAAATACGCTGAAAAGACCTTGAATGATGGTCCTTATTATGGAATTGAGGCATGTAATGAAGTTTTGAATTGCTACAGTCTTACTATTGGGCCTGCACTAAAATATGAATGCCTGTGTATTCGAGCTGCACTATTGCTTAAGAGGAAGTGGAAAAATGATGCTCACATGGCCATAAGGGACTGCTGTGCTGCTAGGAAAATTGATAACTACGACTACAAAGCACTTTACTATATGTCAGATGCATTGTCACAGTTAGGAAGGCACAAAGAAGCATTGGATTTTGCTGTTGCTGCTCAGCTGTTGGCCCCATCCATACCTGAAGTTGCAGAAAGAGTAGAGAAAGCTAAGAAGGACATTTCTTCAGCCGAGGCAGAGAAAAATAACAAGACAAATGATGGAGGATCAAGATTCGATAGTCGAGGTGGGAGAATTTTGTCATTAAGTGACATACTCTATCGTTCGGAGGCTAACAGTGATGCTTCCCAAGATGGTCCAAGATCAGAGAGGGATGACTCTGATTATGATGAGGAGTTGGAGTTGGACTTTGAAACATCAATGTCTGGTGATGAGGGACATGATGTTGAGTCCAATATTCTTCATGGGAGTTTAAACCTTAGAATTCACCGAAGGGGCGACTCCAGAGAAAGCACTGGTGCGAATGGCACCGTTGAATCACCTTCGTCCTCATCACAGAATGACAAAGCTTATCAGTCTGAAGCAGCTATTGACATGAATCAAAGATTTATTGGCCATTGCAATGTTGGAACTGATATAAAACAGGCCAGTTTTCTTGGTCAAAGAGGTGAGTTTGTTGCTAGTGGAAGTGATGATGGCAGATGGTTTATCTGGGAAAAGCGAACTGGTAGACTCATAAAAATGCTGAACGGTGATGAATCTGTTGTAAATTGTGTACAATGCCATCCATTTGATTTTGTTGTGGCAACAAGTGGAATTGATAGCACAATAAAGTTATGGACTCCAAGTGCCCCTGTTCCATCTGCCGTAGCTGGTGGTGCAGCGGGACCAGAGACTGCTGATGTATTGGTTGCTATGGAGAGCAATCAACAAAAGTTATCCCGTGGTCGTGATTCCATTCTGCCCTTTGAGCTTTTGGAGCCATTTAGAATGCATGAGTTTCCCGAAGGATCCCTGCGCCTGCGTCCTTTTGAATGTGCCCAGAGCTAA 2280 0.4285 MDSVPFHDGNIHHILETRYLHSRQDVNHRLQTHSSLIRRLTQERELEGHLGCVNAVAWNSRGSLLISGSDDTRINIWNYADRKLLHSIDTGHTANIFCTKFIPETSDEIVVSGAGDAEVRLFNLSHLNGSAENAIAPSALYQCHTRRVKKLAVENGNPNMVWSASEDGTLRQHDFREGTSCPPAGSSHQECRSVLLDLRSGAKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFGPDGDEVLLSYSGEHVYLMNVNHAGLNDMQYTSGDVSKLMTYSPTINGMELQPSISSVFPNGFSIKKNVAAKIDYCRKLIKYAEKTLNDGPYYGIEACNEVLNCYSLTIGPALKYECLCIRAALLLKRKWKNDAHMAIRDCCAARKIDNYDYKALYYMSDALSQLGRHKEALDFAVAAQLLAPSIPEVAERVEKAKKDISSAEAEKNNKTNDGGSRFDSRGGRILSLSDILYRSEANSDASQDGPRSERDDSDYDEELELDFETSMSGDEGHDVESNILHGSLNLRIHRRGDSRESTGANGTVESPSSSSQNDKAYQSEAAIDMNQRFIGHCNVGTDIKQASFLGQRGEFVASGSDDGRWFIWEKRTGRLIKMLNGDESVVNCVQCHPFDFVVATSGIDSTIKLWTPSAPVPSAVAGGAAGPETADVLVAMESNQQKLSRGRDSILPFELLEPFRMHEFPEGSLRLRPFECAQS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03276 759 Gene3D - 28 131 IPR015943 GO:0005515
Aip07g03276 759 MobiDBLite consensus disorder prediction 481 506 - -
Aip07g03276 759 MobiDBLite consensus disorder prediction 569 601 - -
Aip07g03276 759 ProSiteProfiles Trp-Asp (WD) repeats profile. 659 690 IPR001680 GO:0005515
Aip07g03276 759 SMART WD40_4 134 174 IPR001680 GO:0005515
Aip07g03276 759 SMART WD40_4 606 649 IPR001680 GO:0005515
Aip07g03276 759 SMART WD40_4 209 242 IPR001680 GO:0005515
Aip07g03276 759 SMART WD40_4 652 691 IPR001680 GO:0005515
Aip07g03276 759 SMART WD40_4 81 123 IPR001680 GO:0005515
Aip07g03276 759 SMART WD40_4 39 78 IPR001680 GO:0005515
Aip07g03276 759 SUPERFAMILY WD40 repeat-like 39 690 IPR036322 GO:0005515
Aip07g03276 759 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 78 - -
Aip07g03276 759 Pfam WD domain, G-beta repeat 44 78 IPR001680 GO:0005515
Aip07g03276 759 SUPERFAMILY TPR-like 399 475 IPR011990 GO:0005515
Aip07g03276 759 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 8 758 IPR045151 -
Aip07g03276 759 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
Aip07g03276 759 Gene3D - 132 324 IPR015943 GO:0005515
Aip07g03276 759 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 8 758 - -
Aip07g03276 759 MobiDBLite consensus disorder prediction 520 539 - -
Aip07g03276 759 Coils Coil 470 497 - -
Aip07g03276 759 MobiDBLite consensus disorder prediction 481 498 - -
Aip07g03276 759 Gene3D Tetratricopeptide repeat domain 349 501 IPR011990 GO:0005515
Aip07g03276 759 Gene3D - 610 708 IPR015943 GO:0005515
Aip07g03276 759 MobiDBLite consensus disorder prediction 581 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03276 Aip-Chr7 121530163 121540168 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03276 K11807 - gmx:100793917 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03276 07 121530163 121540168 Aip07g03276 07 121530163 121540168 ECH