Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03267 ATGTCTTCCAATTCGTACCGAGGAGGTTCCGCCTACGGTGATGCCGCCCCTTTCCGATCCAGAGAGGGACTTAGCACGAGACCAGCTGCTTCCTCCGATGAAATCCAATTGCGCATTGATCCCATGGACATGGACTTGGACCACGAAATCACCGGTCTTCGCGGCCAAGTCAAAAAGTTGAGAAATGTTGCTCAAGAGATAGGTACAGAAGTAAAGCAGCAGAAGGATTTTTTGGAAGAGCTGCAAACATTGATGACGAACGCTCAAGCCGGTGTTAAGAATAATATAAGAAGATTGAACAAGAGCATTGTTCGAAGTGGTTCAAACCATGTTGTTCATGTGGCATGCAGAAATAGAACTGCTTTTGCGTGTCACATTCATGATTTCTCTTGCTTCTGA 399 0.4586 MSSNSYRGGSAYGDAAPFRSREGLSTRPAASSDEIQLRIDPMDMDLDHEITGLRGQVKKLRNVAQEIGTEVKQQKDFLEELQTLMTNAQAGVKNNIRRLNKSIVRSGSNHVVHVACRNRTAFACHIHDFSCF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03267 132 SUPERFAMILY SNARE fusion complex 34 101 - -
Aip07g03267 132 CDD SNARE_Qc 45 101 - -
Aip07g03267 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 40 102 IPR000727 -
Aip07g03267 132 PANTHER GOLGI SNARE BET1-RELATED 9 117 IPR039897 GO:0015031|GO:0030173
Aip07g03267 132 SMART tSNARE_6 35 102 IPR000727 -
Aip07g03267 132 Gene3D - 47 109 - -
Aip07g03267 132 MobiDBLite consensus disorder prediction 1 34 - -
Aip07g03267 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03267 Aip-Chr7 121425248 121427584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03267 K08505 - cpap:110816711 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03267 07 121425248 121427584 Aip07g03267 07 121425248 121427584 ECH