Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03255 ATGGTGGGCAGTAACAGTGGCAGTGGTACTATCATCATCAACGAAGCAGAGAGTCCCTTGCTACATCAACCCCACGACGAAGCCACTCTCATACAACGAACATGCTCCGAATCAAACAGCCTTTGGCAAATTGCTGCCCCTTCCATCTTCACCCGCCTTGCCATGTTCTCCATCACCGTCGTCACGCAGTCCTTCGCCGGCCACCTCTCCGACATCGACCTCGCCGCCTTCTCCATTTCCTGCACCGTTCTCATCTCCATCACCTTCGGATTCTTGCTGGGCATGGCGAGCGCGCTTGAAACCCTCTGCGGCCAAGCTTACGGTGCCAGAAAGCATCACATGCTGGGAATCTACCTGCAACGCTCGTGGCTCGTTCTCTTCTTCTCTTCGCTCTTCATGATTCCGATCTTCGTGTTCGCATCTCCGATCTTGAAGTTCATTGGACAGCCTTCAGCGGTTGCAGAACGCACCGGTTTGGTTGCCATATGGCTGATCCCTCTTCACCTCAGCTTTCCCTTCCAATTCTCGCTGCAGAGATTCTTGCAGTGTCAGCTCAAGACACGTGTCGCGGCGTGGATGGCAGGTGTTTCGCTTGCCATCCACGTGGCAGTGAGTTTGGTTTTTGTGTCCAAGATGAAGGTTGGGATTGTTGGTGCTGCGCTTTCTATTGGGTTCTCGTGGTGGGTTTCGGTTGTGGGAATGCTTTCGTACACTCTCTTTGGTGGGTGTAAAGATACATGGACTGGTTTCTCTTCTGAAGCTTTTCTTGGACTCTGGGAATTCTTCAAGTTATCTTTTGCTTCTGGCATCATGCTTCTGTTAGAGAATTTCTATTACAGGTTGTTGCTTATAATGTCGGGTTATATGGACAACTCTGAGGTTGCTATCGATGCTCTTTCGGTTTGTAATACTATTTATGCTTGGGAATCCATGATACCTCTTGGATTTTTGGCTGCATCCGGGGTGCGTGTAGCAAATGAGCTTGGCGCAGGCAACGCAAAAGGGGCAAAATTTGCAACAGCTATTTCATTGCTAAACACTGTGGTGGTGGGATTTATATTTTGGTTGATAATTATGATCTTCAATGAGAATCTTGCTTTGATCTTTACATCAAGCTCCGCTATTGTCCAAATGGTCAATGAGCTGTCAATCATGTTGGCTTTTACAATTCTAATTAATTGCCTCCAACCCGTTCTTTCAGGGGTAGCAGTGGGATGTGGAAATCAAGCAATAGTGGCATACATTAACATTGCAAGTTACTATTTGATGGGAATGCCTCTTGGGATCCTCCTAGGCTGGTTGCTGCCTTCGGGTATTATTGTACTGAAAGCACAAGTTATTGTCAAGGAGAAATCACTAGTCTCCAACCAGTAA 1374 0.476 MVGSNSGSGTIIINEAESPLLHQPHDEATLIQRTCSESNSLWQIAAPSIFTRLAMFSITVVTQSFAGHLSDIDLAAFSISCTVLISITFGFLLGMASALETLCGQAYGARKHHMLGIYLQRSWLVLFFSSLFMIPIFVFASPILKFIGQPSAVAERTGLVAIWLIPLHLSFPFQFSLQRFLQCQLKTRVAAWMAGVSLAIHVAVSLVFVSKMKVGIVGAALSIGFSWWVSVVGMLSYTLFGGCKDTWTGFSSEAFLGLWEFFKLSFASGIMLLLENFYYRLLLIMSGYMDNSEVAIDALSVCNTIYAWESMIPLGFLAASGVRVANELGAGNAKGAKFATAISLLNTVVVGFIFWLIIMIFNENLALIFTSSSAIVQMVNELSIMLAFTILINCLQPVLSGVAVGCGNQAIVAYINIASYYLMGMPLGILLGWLLPSGIIVLKAQVIVKEKSLVSNQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03255 457 Pfam MatE 269 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip07g03255 457 Pfam MatE 47 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip07g03255 457 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 448 - -
Aip07g03255 457 CDD MATE_eukaryotic 37 435 IPR045069 GO:0042910|GO:1990961
Aip07g03255 457 TIGRFAM matE: MATE efflux family protein 47 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip07g03255 457 PANTHER PROTEIN DETOXIFICATION 24 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03255 Aip-Chr7 121295304 121299486 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03255 K03327 - gmx:100814869 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03255 07 121295304 121299486 Aip07g03255 07 121295304 121299486 ECH