Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03254 ATGAAGAAACACGGCGCACACGAAGAACATGGCAACCTTACCGAAACCCTCCTCCTTCAACATAACGACCAAAAGATACAACATCAGCTCTGGATCGAGACCAAGAAGCTATGGCACATCGTGGGCCCCTCCATCTTCAGCCGCGTCGCCACCTTCACCATGAACGTCGTCACCCAAGCCTTCGCTGGACACCTCGGCGAACTCGAACTCGCCTCCATCTCCATCGCCAACACCGTCATTGTTGGCTTCAATTTTGGCCTCCTCTTGGGAATGGCCAGCGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCAAAAAAGTACGGCATGCTGGGGATATACATGCAGAGGTCATGGGTGGTTTTGTTTCTGTGCTGCTTCTTGCTCTTGCCATTTTACGTATTTGCCACTCCCATCTTGAAGCTTCTAGGGCAGCCTGATGACGTGGCGGAATGGAGTGGTGTGGTGGCTGTGTGGCTCATCCCTCTTCACTTCAGCTTTGCATTCCAGTTCCCGCTGCAGAGGTTTCTTCAGTGCCAGCTCAAGACGGCGGTGATTGCGTGGGTTTCGTTGCTGGGCCTGGTGGTCAACGTGGTCACCAGCTGGCTGTTCATCTATGTGTGGGACTTTGGAGTTGTCGGTGCTGCCATTGCTCTGAATTTGTCCTGGTGGGTTCTTGTAATTGGGATGTTTGCTTATACTGCTTGCGGCGGTTGCCCATTGACTTGGACCGGTTTTTCCATGGAAGCGTTTTCTGGTCTCTGGGACTTTCTCAAACTCTCTGCTGCTTCTGGTGTCATGCTATGCTTAGAAAACTGGTATTACAGAATACTGGTGCTAATGACTGGACAGTTAGAGAATGTGACGGTTGCTGTTGATGCCTTGTCGGTATGTATGACTATCAATGGTTGGGAAATGATGATTCCCCTGGCTTTCTTCGCTGGTGTTGGAGTAAGGGTAGCAAATGAGCTAGGCGCAGGAAATGGGAAAGGAGCAAAATTTGCAACACAAGTGGCAGTGGCACAATCAATTGTGATTGGGGTTGTGTTCTGCGTGATAATAATGATTTTTCACGACCAATTCGCTTACTTATTCACCTCCAGTCCCCAAGTCCTTGATGCCGTTGACCACATGGCTTTCCTCTTAGCCATCACCATCCTCCTCAACAGTGTTCAACCCATTTTGTCAGGAGTGGCTGTTGGTTCGGGATGGCAAGCATATGTAGCATATATAAATATAGGGTGCTATTATGTTATTGGACTCCCTCTTGGAATGATCATGGGATGGATCTTCAAAACTGGCGTCGGAGGTATATGGGGAGGGATGATTTTTGGAGGCACTGGAATTCAGACGCTCATACTCATCGTTGTAACATCACGATGTGATTGGGAAAAGGAGGCTGAAGAAGCTAGTTCCCGGGTAAAGAAGTGGTCAAATTCTAAATCGAACGACCAACTAGAGGGCACCTCTGATCCCCATTAA 1482 0.4939 MKKHGAHEEHGNLTETLLLQHNDQKIQHQLWIETKKLWHIVGPSIFSRVATFTMNVVTQAFAGHLGELELASISIANTVIVGFNFGLLLGMASALETLCGQAFGAKKYGMLGIYMQRSWVVLFLCCFLLLPFYVFATPILKLLGQPDDVAEWSGVVAVWLIPLHFSFAFQFPLQRFLQCQLKTAVIAWVSLLGLVVNVVTSWLFIYVWDFGVVGAAIALNLSWWVLVIGMFAYTACGGCPLTWTGFSMEAFSGLWDFLKLSAASGVMLCLENWYYRILVLMTGQLENVTVAVDALSVCMTINGWEMMIPLAFFAGVGVRVANELGAGNGKGAKFATQVAVAQSIVIGVVFCVIIMIFHDQFAYLFTSSPQVLDAVDHMAFLLAITILLNSVQPILSGVAVGSGWQAYVAYINIGCYYVIGLPLGMIMGWIFKTGVGGIWGGMIFGGTGIQTLILIVVTSRCDWEKEAEEASSRVKKWSNSKSNDQLEGTSDPH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03254 493 MobiDBLite consensus disorder prediction 476 493 - -
Aip07g03254 493 CDD MATE_eukaryotic 33 469 IPR045069 GO:0042910|GO:1990961
Aip07g03254 493 MobiDBLite consensus disorder prediction 471 493 - -
Aip07g03254 493 TIGRFAM matE: MATE efflux family protein 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip07g03254 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 474 - -
Aip07g03254 493 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip07g03254 493 Pfam MatE 265 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip07g03254 493 PANTHER PROTEIN DETOXIFICATION 16 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03254 Aip-Chr7 121277526 121282081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03254 K03327 - gmx:100500204 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03254 07 121277526 121282081 Aip07g03254 07 121277526 121282081 ECH