Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03229 ATGACATCACAACCTCACAACCTCATAATATATGCACTATTCCAAATACGTGCACTAAGGAGTGGATCCCACCACATCTTTGAGGAATTGAAGAGAGAAGAGCTTCGTTTTGTACAAACATTGGAGAGAGAAGAAAAGTTGCTTGAAGAGAAATTTGCTAATGCTTTGTCAAGTGCTAAGAAAAATGGAACTGCACCTTGCTTGGTTGGCGAAGACGTATTTCTTTTGTATGAAACATATGGATACCCTATTGAAATAACAAAAGAAGTGGCTAAAGAATGTGGTGTGAGTGTTGATATAAATAGTTTTGATACTGATATGGAGAAGCAAAGGCGCCAATCTCAAGCTGCACACAATATTGTCAAACTTGCCACAGGAAACAGGGCAAATATTGCAGAAAATGCATCTGATACTGAATTTATAGGCTATGACAATCTTTATGCTAAATCAAATGTACAAAGCCTAGTAGTAAATAGTGATCCAGCTGCACAAGTGCGTGTTGTAGAGGTTCTTGGTGTATCAATGGAACTTTGA 534 0.3783 MTSQPHNLIIYALFQIRALRSGSHHIFEELKREELRFVQTLEREEKLLEEKFANALSSAKKNGTAPCLVGEDVFLLYETYGYPIEITKEVAKECGVSVDINSFDTDMEKQRRQSQAAHNIVKLATGNRANIAENASDTEFIGYDNLYAKSNVQSLVVNSDPAAQVRVVEVLGVSMEL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03229 177 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 19 177 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Aip07g03229 177 Coils Coil 38 58 - -
Aip07g03229 177 PANTHER ALANYL-TRNA SYNTHETASE 16 166 - -
Aip07g03229 177 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 19 133 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Aip07g03229 177 Pfam tRNA synthetases class II (A) 19 169 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Aip07g03229 177 PANTHER ALANINE--TRNA LIGASE, MITOCHONDRIAL 16 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03229 Aip-Chr7 120776108 120779198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03229 K01872 - lja:Lj1g3v3330180.3 206.838