Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03122 ATGCTTAAGGAGGAGAAGAAGAAAAAACGACGTTCCAATCGTCGTTCCAAACAAAACCCTACTTCCTCCTCAGCGAACGAGATCTGTAGCGTATCGTCGGAATTCTTTGGTGACGGCACTGCGGCGCCTACTCCGACGGCTTCCCCAATGAAGCAGCAAGGTGACAATGCTCCTTACTGTTACGATCAGCAACACGATGATACAACTTTTGTTTCGATTCCGGCAGCGGCAGCCCCAATGCATATCAACGAGCAATCGCCGCCGCAATTCGTCGATGCGCAAACACAAGATTCATGGAATGGTTGGAACGGAGATTTGGTCCCTTCTCCCCCTCAGATAGGGTTTTGCCCCCAAAGGTGTTATTTTAGTCCACACTGGCCAATGGAAGCTGTTGAGATGGCACTTGAGAAGGGTGATGTTTTTAAAGCTTCCTTTCGAGTGAATGCTCACAACAGACTTGAGGCATACTGCAAAGTTGACGGATTGCCAACAGATGTACTCATTAGCGGAATTCCAGCCCAGAACAGAGCTGTGGAAGGTGACATTGTTGCTATTACAATGGATTCATTCTCATCGTGGACAAAAATGAAAGGATCTAACAGAACTTGCAACAATTATGCAACACCAGAAGATTGTAGTCTCCTCAGAGAAGCTGATGATGTGGCTGGCAATATCTATAAAGGAAAAGGCGAGTTAGATAAAGATAAAGATACCAATTATGACTCTGCTGATTGCAGAAACTGCCCTAGTCAAAACCAGGAGGATACTGAGGTCTATCCCAACCCTAATAAAAGTTGTCATTTTCCTGAAAAGAAGTATGCCTATGAAGATAGTGGTTCCCTGGGTCCAGTTTCACATTTAGATCCAGTTAGACCTGCCAATGAAAGTTTTGATGGGCAGAACAATGCTGCTTTTGAATCTTTGAATATGAGTTCTTGTAGCAAACAAATTGAAGTAATCAGTGCAGTGCAAAAGATGTGCTCCTTAGTTAATGCTTTCCCTTCCAAAAGACCAACTGCCAGGGTGGTTGCTATAATTGAGAAGTCTCCACGTCGAGAGCGCATTGTAGGTCAACTCAATGTGAAGCAGTGGATTTCTGTCAAGGGTGTAAGCAGAAAAGATGCAAAGAAAAATAAGAATCTGGTTTCTGATAATGAGTACATCCAGTTGACACCAATTGATCCAAAATTTCCTAAAATGATGCTTTTTGTTAGAGATTTGCCAGAACACATTAAGAAAAGACTACAAAGTGGTGATGTGACAACTGAAATGGATCTGATAGCAGCACAACTTTATGATTGGGGAGAAGAGAGTCTTTTTCCCAGAGCTCACATCTTGCATGTGTTTGGAAAAGGTAGCAAAGTTCAGACACATTTAGATGCAATTCTGTTTCAGAATACGATTTGTGAGTCTGAATTTTCACCTGAAGCTATGACTTGCCTACCATGTTTTCCATGGGAGGTGCCAGAAAAGGAATTGCAGAGTAGACTGGATCTTAGAAATCTGTGCATATTTACTATTGATCCTTCAACTGCCACTGATCTGGATGATGCACTGTCGATTGAGAAGTTACCTAATGGAAATTGTAGAGTAGGTGTCCACATTGCCGATGTATCATACTTTGTTTTACCAGGCACTGTCTTAGATGATGAGGCTCAGTTTAGGTCAACAACTGTCTATATGTTGCAAAAAAAGATACCAATGTTACCCGCATTATTTTCAGACAATATAGGCTCACTTAATCCTGGAGTGGATCGAGTGGCGGTTTCAATGCTCCTTGACATAAATCCTGCTGGGGATGTTGTGAACCGTTGGATTGGTCGTAGTGTTATCCAGTCTTGTTGTAAGCTTTCATACGAACTTGCTCAGGATATTATTGATGGGGCAGTTGATTTTGAAAGTTCAAACATCATAGGAGAGAGCTACCCAAAGGTGCATGGTCAATTTGGATGGCCTGACATTATTACTTCTGTGAAGAGCTTATGTGAAATTTCAAATGTTTTGAAACATAAGAGGTTCAATGATGGGGCTCTAAGGCTTGAAAATCCTAAAGTTGCTTTCCTGTTTGATGAGTATGGACTTCCTTATGACCTTATACTTTCTGAACGGAAAGAATCAAATTTTCTTGTTGAGGAATTTATGCTTTTGGCCAATACAACAGCAGCTGAAGTCATTTGTAGAGTTTATCCTGATAATGCATTATTGCGAAGGCATCCTGAACCTAATATGCGAAAACTGGGAGAGTTTGTGGCATTCTGTCAGAAGCATGGTTTAAAATTGGACACATCTTCGTCTGGCCAGTTCCATCGGTCACTAGATCTGATTAAGGAAAAGCTGAAGGATGACTCTGTGCTTTTTGATATTCTTATTTCCTATGCGACAAGACCAATGCAGTTGGCATGTTACTTCTGTAGTGGTCAGTTAAAGGAAAGGAAGCATGAGTGGGGTCATTATGCATTAGCTGTTCCTTTTTACACTCACTTTACATCACCACTGCGGCGGTATCCTGATATTGTTGTTCATAGGACACTACTTGCTGCTTTGGAGGCTGAGGAATTATATCTAAAGCATCGTAAGGCATTGCTAGTTAACAAGGAAGAGGAATTGCAGCGATGTTTCACAGGCATTATCTTTGATAAGAATGCTGCAGAATCTGTGGAAGGCAGGGAAGCTCTATCAGCTGCAGCTTCGAAACATGGAGTCCCATCCACGGAAGTACTTGCAGATGTTGCTACTTATTGCAATGAGAGAAAACTAGCCAGTCGAAATGTTAAAGATGCTTGTGATAAACTTTACATGTGGCATTTCTTGAAGAAGGAGATCTTATTGTCTGAAGCAAGGGTTCTGGGACTGGGCCCAAGATTCATGTCAATCTATATTCAGAAGCTAGCCATTGAGCAACGCATCTATTATGATGAAGTTGAAGGGTTATCAGTGGAGTGGCTCGAAGCAACATCATCGGTGGTGCTAAGTATGTCTGCTCATAGGCGTGCATTCCGGAGGGGTAGCCATAATAAATGGAGGGCGTTTGAAGAAGTTGCTTTCGTGGTTGATCCATATGACCTGAAAGTTGCATCGGACGGTTCTGATGGATGTGAGAACAGGGATCCCAATTCGAGGACCGAAATTGACCCTGCAGTTTTCCCTCTCACGGTACATCTTCTCTCAACAATTCCGGTGGTACTCCATGCTGTTGGTGGTGATGATGGACCCCTTGAAATTGGGGTGAGGCTGTACATGAGCTCGTATTACGGGTAA 3258 0.4254 MLKEEKKKKRRSNRRSKQNPTSSSANEICSVSSEFFGDGTAAPTPTASPMKQQGDNAPYCYDQQHDDTTFVSIPAAAAPMHINEQSPPQFVDAQTQDSWNGWNGDLVPSPPQIGFCPQRCYFSPHWPMEAVEMALEKGDVFKASFRVNAHNRLEAYCKVDGLPTDVLISGIPAQNRAVEGDIVAITMDSFSSWTKMKGSNRTCNNYATPEDCSLLREADDVAGNIYKGKGELDKDKDTNYDSADCRNCPSQNQEDTEVYPNPNKSCHFPEKKYAYEDSGSLGPVSHLDPVRPANESFDGQNNAAFESLNMSSCSKQIEVISAVQKMCSLVNAFPSKRPTARVVAIIEKSPRRERIVGQLNVKQWISVKGVSRKDAKKNKNLVSDNEYIQLTPIDPKFPKMMLFVRDLPEHIKKRLQSGDVTTEMDLIAAQLYDWGEESLFPRAHILHVFGKGSKVQTHLDAILFQNTICESEFSPEAMTCLPCFPWEVPEKELQSRLDLRNLCIFTIDPSTATDLDDALSIEKLPNGNCRVGVHIADVSYFVLPGTVLDDEAQFRSTTVYMLQKKIPMLPALFSDNIGSLNPGVDRVAVSMLLDINPAGDVVNRWIGRSVIQSCCKLSYELAQDIIDGAVDFESSNIIGESYPKVHGQFGWPDIITSVKSLCEISNVLKHKRFNDGALRLENPKVAFLFDEYGLPYDLILSERKESNFLVEEFMLLANTTAAEVICRVYPDNALLRRHPEPNMRKLGEFVAFCQKHGLKLDTSSSGQFHRSLDLIKEKLKDDSVLFDILISYATRPMQLACYFCSGQLKERKHEWGHYALAVPFYTHFTSPLRRYPDIVVHRTLLAALEAEELYLKHRKALLVNKEEELQRCFTGIIFDKNAAESVEGREALSAAASKHGVPSTEVLADVATYCNERKLASRNVKDACDKLYMWHFLKKEILLSEARVLGLGPRFMSIYIQKLAIEQRIYYDEVEGLSVEWLEATSSVVLSMSAHRRAFRRGSHNKWRAFEEVAFVVDPYDLKVASDGSDGCENRDPNSRTEIDPAVFPLTVHLLSTIPVVLHAVGGDDGPLEIGVRLYMSSYYG 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03122 1085 Hamap DIS3-like exonuclease 2 [DIS3L2]. 3 1060 IPR028591 GO:0000175|GO:0034427
Aip07g03122 1085 Pfam RNB domain 496 849 IPR001900 GO:0003723|GO:0004540
Aip07g03122 1085 Gene3D - 367 453 - -
Aip07g03122 1085 MobiDBLite consensus disorder prediction 17 58 - -
Aip07g03122 1085 PANTHER RIBONUCLEASE 6 1083 - -
Aip07g03122 1085 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g03122 1085 SUPERFAMILY Nucleic acid-binding proteins 339 468 IPR012340 -
Aip07g03122 1085 Gene3D - 117 211 - -
Aip07g03122 1085 ProSitePatterns Ribonuclease II family signature. 817 841 IPR022966 -
Aip07g03122 1085 SMART RNB_2 496 850 IPR001900 GO:0003723|GO:0004540
Aip07g03122 1085 SUPERFAMILY Nucleic acid-binding proteins 456 939 IPR012340 -
Aip07g03122 1085 MobiDBLite consensus disorder prediction 1 58 - -
Aip07g03122 1085 Pfam Dis3-like cold-shock domain 2 (CSD2) 387 466 IPR041505 -
Aip07g03122 1085 PANTHER DIS3-LIKE EXONUCLEASE 2 6 1083 - -
Aip07g03122 1085 SUPERFAMILY Nucleic acid-binding proteins 120 348 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03122 Aip-Chr7 118879502 118887803 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03122 K18758 - gmx:100815252 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03122 07 118879502 118887803 Aip07g03122 07 118879502 118887803 ECH