Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03087 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCAACTACTTACTCCATGGATTTGAAGAAAGACACTTTGCTTCAACTTCAGAATCAAAGATTGAGGCCTAAATTCTCTCATCTCCCATTCAACCCAATTCCTTCTAATTCTCTCTCTTTTTCACCTCCTACATTCACAACTCTGGCACTCTTCAAATCCAAGACCAAAGCCCCTCCTAAGAACGAGCTCTTTGTTGGTCGTGTTGCCATGATTGGTTTTGCTGCATCAATTTTAGGAGAAGCAATTACTGGTAAAGGAATTTTAGCACAATTGAACTTGGAAACAGGGGTTCCAATTTATGAAGCTGAGCCTCTTCTCCTTTTCTTCATCCTTTTCACACTGCTTGGAGCCATTGGAGCACTTGGTGACCGTGGTAAATTCGTTGATGATGATGAACCTAACACTGGAGGTGTCATTCCTCCAGGCAAAGGCTTCAGATCAGCTCTTGGTCTCAAAGAAGGAGGTCCTTTGTTTGGATTCACCAAAGCAAACGAACTATTTGTTGGAAGATTGGCTCAATTGGGATTTGCATTCTCTTTAATTGGAGAGATTATTACAGGGAAAGGAGCACTAGCACAACTCAACATTGAGACAGGGGTACCCATCAATGAAATTGAACCCCTTGTGTTGTTCAATGTTGCTTTCTTCTTCATTGCTGCTCTCAATCCTGGAACTGGTAAATTTGTCACAGATGAAGAGGAAGACTAG 741 0.4197 MAQTMLLMSSVSTTYSMDLKKDTLLQLQNQRLRPKFSHLPFNPIPSNSLSFSPPTFTTLALFKSKTKAPPKNELFVGRVAMIGFAASILGEAITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDDEPNTGGVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFIAALNPGTGKFVTDEEED 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03087 246 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 169 232 - -
Aip07g03087 246 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 71 157 - -
Aip07g03087 246 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 169 232 - -
Aip07g03087 246 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 71 157 - -
Aip07g03087 246 SUPERFAMILY Chlorophyll a-b binding protein 64 225 - -
Aip07g03087 246 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 71 - -
Aip07g03087 246 Gene3D Chlorophyll a/b binding protein domain 109 217 - -
Aip07g03087 246 Gene3D Chlorophyll a/b binding protein domain 5 108 - -
Aip07g03087 246 Pfam Chlorophyll A-B binding protein 64 191 IPR022796 -
Aip07g03087 246 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 71 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03087 K03542 - gmx:100807355 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03087 07 118232595 118235118 Aip07g03087 07 118232595 118235118 ECH