Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03077 ATGGATGTGAAAGGAACAAGTGGGGTTGTTCCATTGAGGAAGGTGTTGTTTCTGGTTCTAATCCTTTGTGCAATTTTCTCAGTTTCTTTGTCAAAAGTGAATGATACAAATGATCAGATTCTCAACGCCAAGAAGCCACAACCAAAACCCGCAGCTCCTTCTAGATCATCTGGTCACACTTTTCATTTCGCCATTCAAGGGAATGTCTATCCTCTTGGATATTATACGGTGAAAGTGGCAATTGGAAATCCACCTCAATTATACGACCTTGACATTGACTCTGGTAGTGATCTCACTTGGGTTCAGTCCAAATCCTGTAAGACCTGCACACCTCGTTCACAATATTATCCGTATAACCCCAACAGTAACATCCAATGCAAAGAACCCCTGTGTGCTGCGCTAAATAGAAACTGCGCTCCACCAACTGGGCCATGTAAATATAAAATCGAGTATGCAGACAATGAATTTTGTTCAGGGGTGCTTGTTAGGGACTTTATTTCCTTTAGATTAGACGATGGCTCTATTCTACATCCTCAACTTGGCTTCGGGAGTGGATTTGATCAAACACCTTCTAATCATCATCATTCCTCGCATATCAAAACGGCGGGGGTGTTTGGCCTTGGCAATGGCAAGACAAGCATTTTGTCTCAGCTTTCTTCTCTGGGCTACATTCACAATGTCTTTGGCCATTGCTTGAGTTCCAAAGGAGGAGGTCGTTTATTCCTTGGTGATGATATTAAAACCTCCAAGACTCTTGTTTGGACACCTATCTTGCGCAGTTCCTCCTCCTCCAATATATATTATACGGTGAAAGTGGCAATTGGAAATCCACCTCAATTATACGACCTTGACATTGACTCTGGTAGTGATCTCACTTGGGTTCAGTCCAAATCCTGTAAGACCTGCACACCTCGTTCACAATATTATCCGTATAACCCCAACAGTAACATCCAATGCAAAGAACCCCTGTGTGCTGCGCTAAATAGAAACTGCGCTCCACCAACTGGGCCATGTAAATATAAAATCGAGTATGCAGACAATGAATTTTGTTCAGGGGTGCTTGTTAGGGACTTTATTTCCTTTAGATTAGACGATGGCTCTATTCTACATCCTCAACTTGGCTTCGGGAGTGGATTTGATCAAACACCTTCTAATCATCATCATTCCTCGCATATCAAAACGGCGGGGGTGTTTGGCCTTGGCAATGGCAAGACAAGCATTTTGTCTCAGCTTTCTTCTCTGGGCTACATTCACAATGTCTTTGGCCATTGCTTGAGTTCCAAAGGAGGAGGTCGTTTATTCCTTGGTGATGATATTAAAACCTCCAAGACTCTTGTTTGGACACCTATCTTGCGCAGTTCCTCCTCCTCCAATATGGCAGGCCCTGTAGATTTATTGTTCAATGGGAAGCAAGCTGTTAATGGTCTTGAAGTTATTTTTGACAGTGGAAGCACATACACATACCTCAATAAAAAAGCTTATAATGTGTTGTTTGGTCTGATAAATAATGACTTAGGAAATAAGGTGCAGAGAGCTACTGAGGACACAACACTGGTAATATGTTGGAAGGGTCAAAATCTTTTTGGATATTTCAAAAACATAGTACTGAACTTCCCAAAAACAAAATCTCAGTTCGTACTAACACCACAATCTTATCTCATTGTCTCGGAACGTCATAATACATGCTTAGGGATTTTAGATGGCTCAGAAGAACTTGGAGATATTAACATAATTGGAGACGTCTCTTTTCAAGATAAGCTAGTGGTTTATGACAACGAGAAGATGCAGATTGGATGGGTTCCTGACAATTGTGCTACGTCTTCATTTACAAATGCCAAATCATTACGAGTTCATCACAGAGGAAATATTTTGTCCTAA 1878 0.4137 MDVKGTSGVVPLRKVLFLVLILCAIFSVSLSKVNDTNDQILNAKKPQPKPAAPSRSSGHTFHFAIQGNVYPLGYYTVKVAIGNPPQLYDLDIDSGSDLTWVQSKSCKTCTPRSQYYPYNPNSNIQCKEPLCAALNRNCAPPTGPCKYKIEYADNEFCSGVLVRDFISFRLDDGSILHPQLGFGSGFDQTPSNHHHSSHIKTAGVFGLGNGKTSILSQLSSLGYIHNVFGHCLSSKGGGRLFLGDDIKTSKTLVWTPILRSSSSSNIYYTVKVAIGNPPQLYDLDIDSGSDLTWVQSKSCKTCTPRSQYYPYNPNSNIQCKEPLCAALNRNCAPPTGPCKYKIEYADNEFCSGVLVRDFISFRLDDGSILHPQLGFGSGFDQTPSNHHHSSHIKTAGVFGLGNGKTSILSQLSSLGYIHNVFGHCLSSKGGGRLFLGDDIKTSKTLVWTPILRSSSSSNMAGPVDLLFNGKQAVNGLEVIFDSGSTYTYLNKKAYNVLFGLINNDLGNKVQRATEDTTLVICWKGQNLFGYFKNIVLNFPKTKSQFVLTPQSYLIVSERHNTCLGILDGSEELGDINIIGDVSFQDKLVVYDNEKMQIGWVPDNCATSSFTNAKSLRVHHRGNILS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03077 625 PANTHER ASPARTYL PROTEASES 10 262 IPR001461 GO:0004190|GO:0006508
Aip07g03077 625 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 262 - -
Aip07g03077 625 ProSiteProfiles Peptidase family A1 domain profile. 268 600 IPR033121 -
Aip07g03077 625 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 265 606 - -
Aip07g03077 625 ProSiteProfiles Peptidase family A1 domain profile. 75 272 IPR033121 -
Aip07g03077 625 PRINTS Pepsin (A1) aspartic protease family signature 478 489 IPR001461 GO:0004190|GO:0006508
Aip07g03077 625 PRINTS Pepsin (A1) aspartic protease family signature 274 294 IPR001461 GO:0004190|GO:0006508
Aip07g03077 625 PRINTS Pepsin (A1) aspartic protease family signature 576 591 IPR001461 GO:0004190|GO:0006508
Aip07g03077 625 Gene3D Acid Proteases 436 612 IPR021109 -
Aip07g03077 625 Pfam Xylanase inhibitor N-terminal 268 437 IPR032861 -
Aip07g03077 625 Pfam Xylanase inhibitor N-terminal 75 244 IPR032861 -
Aip07g03077 625 Pfam Xylanase inhibitor C-terminal 477 599 IPR032799 -
Aip07g03077 625 SUPERFAMILY Acid proteases 68 263 IPR021109 -
Aip07g03077 625 PANTHER ASPARTYL PROTEASES 265 606 IPR001461 GO:0004190|GO:0006508
Aip07g03077 625 SUPERFAMILY Acid proteases 264 605 IPR021109 -
Aip07g03077 625 Gene3D Acid Proteases 51 244 IPR021109 -
Aip07g03077 625 Gene3D Acid Proteases 246 435 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03077 Aip-Chr7 118061989 118069935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03077 246 604 Miscellaneous Gene Families AT1G44130 44.359 9.40e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03077 - - gmx:100783194 356.295