Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03058 ATGTTGAAGCCATCGTCATGCTTCTACTACTCCTCTCTTCTCCTCCTTCTAACGGCGGCAGCGTTTGTCACCGTCCTCGCCACCGTCACCTACGACGGCAGATCCTTAATTATTGATGGCCAACATAGAATCTTATTCTCCGGTTCTATTCACTATCCTCGCAGCACTCCTGAGATGTGGCCTGATTTAATCACAAAAGCTAAAGAAGGTGGGTTAGATGTCATACAAACTTACGTCTTTTGGAACCTTCATGAGCCTCAACAAGGACAGTACAACTTTAGTGGAAGACGTGATTTAGTGAGATTCATTAAGGAAATTCAAGCACAAGGCTTATATGTAACCCTTCGAATTGGACCCTACATTGAGAGTGAATGGACTTATGGGGGTCTACCATTGTGGTTACATGACATTCCGGGTATTACTTTTAGAACTGATAACAATCAATATAAGTTTCACATGCAAAGGTTCGCTGCCAAAATAGTCAACCTGATGAAATCAGCCAATCTTTATGCTTCTCAAGGAGGGCCTATAATACTTTCTCAGATTGAAAATGAATATGGAAATGTTGAAAAGGCTTATCATGAGCAAGGAAGCTCCTATATTCGTTGGGCTGCTCAAATGGCCGTTGGACTCCATACTGGGGTGCCTTGGATTATGTGCAAGCAAGATGATGCCCCTGATCCAATGATAAATGCTTGCAATGGCATGAGGTGTGGAAAAACATTTAAGGGTCCAAACTCTCCTAACAAGCCTTCTTTATGGACAGAGAATTGGACTAGTTTTTATCAAGCCTTTGGAGAAAAGCCATATCTAAGATCAGCAGAAGACATTGCATATAATGTTGCTCTGTTCATTGCTAAGAAAGGAAGCTATGTCAATTACTACATGTACCATGGAGGAACCAATTTTGACAGAACGGCATCTGCTTATATAATAACGGCTTATTATGATGAAGCTCCATTGGATGAATATGGATTGGTTAGGCAACCAAAATGGGGTCATCTAAAGGAGCTACATGCTGCAATCAAGTCATGTTCAGACACTTTACTAAATGGAACTCAAAGCATAATCACTTTGGGTTCCCAGCAACAAGCTTATGTTTTCAGAAGGAGCTCAAAGGAATGTGCTGCCTTCCTGGAAAATAGTGGTGGAAAGGAATCCACAGTCAAATTTGAGAACATTCCATATGTATTGCCCCCAAGATCAATCAGCATTCTACCAGATTGCAAGAAAGTAACCTTCAATTCAGGCAAGGTAAGCACACAAAACAATGCCAGAGTGAGAGCAATGATACCACAGTTAAAGTTCAATACAGCTGAAAGATGGAAAGTATATACAGAAGCCATCCCTAACTTTGATGATACAACATTAAGAGCAAATAAACTATTAGACCAAATCAGCACAGTAAAAGATACATCTGATTACTTGTGGTACACTTTTAGGTTTAATGACAAAGCTCCTATTGTTCAATCCTTGCTTAGTGTATTAAGTCAAGGGCATGTTTTGCATGCATTCATCAATGGAGTTTTAGTAGGCTCTGCACATGGGACACATGACAGTAGATCTTTTGTCACAGAATGCAAAGTAAATCTGACAAATGGAATGAACGTCTCCTTACTAAGTGCAACTGTTGGAATGCCTGCTTCAGGAGCATATCTAGAGAGCAAAGTTGCTGGTTTGCGTTCAGTAAAAGTTCAAGGCAGAGATTTCACTAATCAAGCATGGGGATATCAGGTTGGCCTGCAAGGAGAGAAACTGCAAATCTATACAGATATTGGATCAAGTAAAGTTCAGTGGGGAAATTTTCAAAGTTCTGTGAAACCACTCACATGGTACCAGACTACATTTGATGCACCAGCAGGCAAAGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGAGAAGCTTGGGTTAATGGCCAAGGTATTGGTCGATATTGGTTATCTTTTCACACAGAAAACGGGGATCCTTCACAAACATGGTATCATATACCACGATCCATCCTAAAATCTACTGGGAATCTACTAGTTCTATTTGAAGAAGAAACTGGGAACCCACTGGAAATTACTCTAGACACAGTTATATATAAGTGA 2097 0.4049 MLKPSSCFYYSSLLLLLTAAAFVTVLATVTYDGRSLIIDGQHRILFSGSIHYPRSTPEMWPDLITKAKEGGLDVIQTYVFWNLHEPQQGQYNFSGRRDLVRFIKEIQAQGLYVTLRIGPYIESEWTYGGLPLWLHDIPGITFRTDNNQYKFHMQRFAAKIVNLMKSANLYASQGGPIILSQIENEYGNVEKAYHEQGSSYIRWAAQMAVGLHTGVPWIMCKQDDAPDPMINACNGMRCGKTFKGPNSPNKPSLWTENWTSFYQAFGEKPYLRSAEDIAYNVALFIAKKGSYVNYYMYHGGTNFDRTASAYIITAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSDTLLNGTQSIITLGSQQQAYVFRRSSKECAAFLENSGGKESTVKFENIPYVLPPRSISILPDCKKVTFNSGKVSTQNNARVRAMIPQLKFNTAERWKVYTEAIPNFDDTTLRANKLLDQISTVKDTSDYLWYTFRFNDKAPIVQSLLSVLSQGHVLHAFINGVLVGSAHGTHDSRSFVTECKVNLTNGMNVSLLSATVGMPASGAYLESKVAGLRSVKVQGRDFTNQAWGYQVGLQGEKLQIYTDIGSSKVQWGNFQSSVKPLTWYQTTFDAPAGKDPVVLNLGSMGKGEAWVNGQGIGRYWLSFHTENGDPSQTWYHIPRSILKSTGNLLVLFEEETGNPLEITLDTVIYK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03058 698 PANTHER BETA-GALACTOSIDASE 13 695 - -
Aip07g03058 698 Pfam Beta-sandwich domain in beta galactosidase 349 419 IPR041392 -
Aip07g03058 698 Gene3D - 563 696 - -
Aip07g03058 698 Gene3D Glycosidases 23 346 - -
Aip07g03058 698 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Aip07g03058 698 SUPERFAMILY Galactose-binding domain-like 403 554 IPR008979 -
Aip07g03058 698 SUPERFAMILY Galactose-binding domain-like 574 695 IPR008979 -
Aip07g03058 698 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Aip07g03058 698 Pfam Glycosyl hydrolases family 35 35 341 IPR031330 -
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 607 621 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 634 650 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Aip07g03058 698 PANTHER BETA-GALACTOSIDASE RELATED 13 695 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03058 Aip-Chr7 117652019 117659681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03058 13 695 Glycoside Hydrolase AT5G63800 59.169 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03058 - - gmx:100789220 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03058 07 117652019 117659681 Aip07g03058 07 117652019 117659681 ECH