Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03053 ATGCCAGCTTCTTCTCCTTCAGAGAACCGCACAAAATGGAGGAAGCGGAAGAGGGAATCGCAAATCAGTCGCCGCCACCAGAAGCACCAGCACCACCACGAAGACGACGACGACGAAGAAGAAGAGAACCCCAATGCCGACAACAACGAAGACCACGACGACGATTCTGAGGACCAAACCCCTAATCCCCAATCTGCTTCCCCTCACCACCACGAGATCGAGGTGCTCTCCGATCACGCCGTCCAGATTTCGCATTTCCCCACTGTTCTCAAGCGCTCCGTTAACCGCCCACACTCCTCCGTCGCCACCGTCATCGCTCTCGAGCGCGCCGCACTCGCCGGCGACTCCAAGGCCCACCAACAGCTCCACAACAGCGGCAGCATTCCGTTCCTCGAGAATGTCTCTCACGGCCAGCTCCAGGCCCTCTCCACCGTCCCGGCTGACAGCCCCTCCCTCGATCATGACCGCGACGGCGGCAGCAGCAGCTCCTCTTTTGTTATCACTCCTCCGCCAGTTTTGGAAGGACGTGGTGTTGTTAAGCGCTTTGGAAATAGGGTTCTTGTTGTTCCAATGCATTCAGATTGGTTTTCACCAGCCACAGTGCATCGACTAGAGAGACAAGCAGTGCCGCATTTCTTTTCTGGAAAATCACCAGGTCATAGTCCGGAGAAGTATATGGAGTGCAGGAACTATATTGTTGGGCTCTACATGGAGGACCCTGGGAAGAGGATTACTGTCTCTGATTGTCAGGGATTGTTGGTTGCAGTTGACAAAGAAGATTTAGCTCGGATTGTCCGGTTCCTTGATCATTGGGGAATCATCAATTACTGTGCTTTGGAGTCATGTCATGCGCCATTTAATGATGCATCCTTCCTGAAGGAGGAGACAAGTGGAGAAGTCCGCGTGCCCTCAGAGTTTCTAAAATCCATAGATAGTCTGATAAGTTTTGACAAGCCCAAGTGTAAGGTCAAAGCAGAAGAAATTTATTCATCATTCACAATGCACAATGCTGATGTCACTGATCTGGACAACAGGATACGGGAACATCTATCCGAAAATCATTGCCATTGTTGTTCTCGTCCTCTTCCTGCTGTATACTATCAGTCACAAAAAGAGGTTGATATTTTACTTTGTACTGGCTGCTTTCATGATGGGAGATTTGTCGTTGGACATTCAAGTATAGATTTTGTAAGGGTGGATTCATCCAGGGATTATGGTGAGGGAGATGGGGATAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCCGAACATGTTGGGACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCAATGGAAGATGGAAAATTGGAAAATATCAACATTCCAAGCGTGTCTTTGCCATCCAATGTGATGAATAGAAATGATAGTGGAAGAATGCATGGCTACGTAAACGGAGATTCTGCAGGAACTGTCCGCCAAAGCAGAGATTCTGACAGCAGGTTTCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTTTGGTAGCCTTTTTAGCCTCTGCCGTTGGACCAAGAGTAGCTGCTGCTTGTGCTCATGCAGCATTAGCAGTATTATCAGAGGATACTTCTGGCAGCACATCGCAAATGGAAGTACAAGGACATGATAATAGGTCAAATTCAGAAAGTGCACATAGTAGAGATCGTGGAGAAACTGCAATTTCAAATAATCATAATGGTCAGTTATCGTTGCTGCTTTTATTTGTTGGCTTTTATGCCCCAGCACAAATTAGATTCATTAGTGTAATTTTCTTCTTGAGGAGTGCTTCTATTGATTTCAGAGGATAA 1857 0.4685 MPASSPSENRTKWRKRKRESQISRRHQKHQHHHEDDDDEEEENPNADNNEDHDDDSEDQTPNPQSASPHHHEIEVLSDHAVQISHFPTVLKRSVNRPHSSVATVIALERAALAGDSKAHQQLHNSGSIPFLENVSHGQLQALSTVPADSPSLDHDRDGGSSSSSFVITPPPVLEGRGVVKRFGNRVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPGHSPEKYMECRNYIVGLYMEDPGKRITVSDCQGLLVAVDKEDLARIVRFLDHWGIINYCALESCHAPFNDASFLKEETSGEVRVPSEFLKSIDSLISFDKPKCKVKAEEIYSSFTMHNADVTDLDNRIREHLSENHCHCCSRPLPAVYYQSQKEVDILLCTGCFHDGRFVVGHSSIDFVRVDSSRDYGEGDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINIPSVSLPSNVMNRNDSGRMHGYVNGDSAGTVRQSRDSDSRFPFANSGNPVMALVAFLASAVGPRVAAACAHAALAVLSEDTSGSTSQMEVQGHDNRSNSESAHSRDRGETAISNNHNGQLSLLLLFVGFYAPAQIRFISVIFFLRSASIDFRG 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03053 618 MobiDBLite consensus disorder prediction 548 577 - -
Aip07g03053 618 SUPERFAMILY Homeodomain-like 186 282 IPR009057 -
Aip07g03053 618 Pfam SWIRM domain 190 276 IPR007526 GO:0005515
Aip07g03053 618 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 63 581 - -
Aip07g03053 618 ProSiteProfiles Myb-like domain profile. 412 455 IPR001005 -
Aip07g03053 618 CDD SANT 412 454 IPR001005 -
Aip07g03053 618 MobiDBLite consensus disorder prediction 1 70 - -
Aip07g03053 618 MobiDBLite consensus disorder prediction 561 575 - -
Aip07g03053 618 ProSiteProfiles Zinc finger ZZ-type profile. 349 404 IPR000433 GO:0008270
Aip07g03053 618 Gene3D - 193 279 IPR036388 -
Aip07g03053 618 SMART sant 409 457 IPR001005 -
Aip07g03053 618 PANTHER SWI/SNF COMPLEX-RELATED 63 581 - -
Aip07g03053 618 ProSiteProfiles SWIRM domain profile. 187 285 IPR007526 GO:0005515
Aip07g03053 618 MobiDBLite consensus disorder prediction 37 57 - -
Aip07g03053 618 Gene3D - 409 459 - -
Aip07g03053 618 Pfam Myb-like DNA-binding domain 412 454 IPR001005 -
Aip07g03053 618 MobiDBLite consensus disorder prediction 145 166 - -
Aip07g03053 618 ProSiteProfiles SANT domain profile. 408 459 IPR017884 -
Aip07g03053 618 SUPERFAMILY Homeodomain-like 410 463 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03053 Aip-Chr7 117612613 117617563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03053 355 451 EF-hand Containing Proteins AT3G07740 32.075 4.48e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03053 K11649 - gmx:100780440 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03053 07 117612613 117617563 Aip07g03053 07 117612613 117617563 ECH