Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03047 ATGAGTTTCTTGAGGCCTAGTGCATTGTACTACTTCCTTGTGGCTTCTCCTTCAATGCGATGGATGCCATGTCAGAGTGGAGGCTTCTTCCGATGGCCTGGTCTTGATGGGTTCATGAGGCTCCTGCTGCTTGCGCTTCTCTGGACCATGTTCTCTGAACTTCACTACATACCCTCTTCTTCTATGTACCCTACCCTTCGTGTTGGTGATCGAATTCTCGTCGAAAAGGCTTCATTTTACCTCAGGAGTCCTGCTGTAAATGATATTGTAACGTTCCGGGATCCAACAAAGCTATCTAGAGACAAAATGGATGGTGTTTTCATTAAGAGAATTGTTGCAAAAGCCGGAGACACAGTTGAGATTCGTAATGGGGAACTCTATGTCAATGGTGTTGCACGGGATGAAGATTTCATAGCAGGTCCACCATCATACACACTGGAGTTAACTGTGAGGCCCTAA 459 0.4597 MSFLRPSALYYFLVASPSMRWMPCQSGGFFRWPGLDGFMRLLLLALLWTMFSELHYIPSSSMYPTLRVGDRILVEKASFYLRSPAVNDIVTFRDPTKLSRDKMDGVFIKRIVAKAGDTVEIRNGELYVNGVARDEDFIAGPPSYTLELTVRP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03047 152 Pfam Signal peptidase, peptidase S26 38 137 IPR019533 GO:0004252|GO:0006465
Aip07g03047 152 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016021
Aip07g03047 152 Gene3D Umud Fragment, subunit A 47 140 - -
Aip07g03047 152 PANTHER SIGNAL PEPTIDASE I 1 150 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aip07g03047 152 CDD S26_SPase_I 56 113 IPR019533 GO:0004252|GO:0006465
Aip07g03047 152 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aip07g03047 152 PRINTS Bacterial leader peptidase 1 (S26A) family signature 107 119 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aip07g03047 152 PANTHER CHLOROPLAST PROCESSING PEPTIDASE-LIKE 1 150 - -
Aip07g03047 152 SUPERFAMILY LexA/Signal peptidase 50 144 IPR036286 -
Aip07g03047 152 TIGRFAM sigpep_I_bact: signal peptidase I 40 139 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03047 Aip-Chr7 117510656 117514262 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03047 K03100 - gmx:100306121 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03047 07 117510656 117514262 Aip07g03047 07 117510656 117514262 ECH