Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02992 ATGGACTCAAGTCTCTTGTTGTCTACATTGAATCAAGAAACAGTTATTGGGGTGGAGCCGCCCCACTTGCCCACAAATTTCGTTTGGCCAATGGAAGACCTTGTTGACGCCCACGGGGAACTCGAAGTTCCAGTGGTAAACCTTTCTGGGTTTCTCACCGGAGACGATGAGGCCACGTGGTGCGTCGCAAAGCTCGTCCATCGAGCATGCTTGAGCCATGGGTTCTTCCAAGTGATTAACCATGGGGTTGATCCTGCACTCATTGCTCAGGCATATGCTCAGATGGACAAATTTTTTAGGGTTCCCACTCAGAGGAAGTTGAGTTTTTCAAAGAAACCAGGTTTGTTGTGGGGATATTCCGGTGCACATGTTGATAGATTCTCTTCCAAACTTCCATGGAAGGAAACCTTGTCTTTCCCTTACTATGATCACACCTTTGAGCCGGTTGTTGCAAATTATTTTAATACCACATTAGGAGAAGATTTTCAACAAACTGGAGTGACGTTCCAGAAGTACTGCAAAGCCATGAAGGAATTAGGGGTGAAGCTAACGGAGCTATTAGCAATAAGCTTAGGGTTGAAAGATAGATTGCATTACAAGGAGTTATTTGAAGAAGGTTGTTCCATAATGAGATGCAACTATTACCCACCATGCCACCAACCAAGCCTTACACTTGGGACAGGACCCCATTGTGATCCAACATCTATAACCATTCTTCACCAAGATCAAGTTGGAGGGCTTCAAGTCTTTGCTGATAAGAGGTGGAAAATTGTTCAACCTCGCTCAGATGCTTTTATTGTTAACATTGGTGATACATTCACGGCACTATCAAATGGAAGGTACAAGAGTTGCTTGCATAGGGCAGTGGTAAACAGTTACAAAGAGAGAAGGTCATTGGCATTCTTTCTATGCCCTAAAGAAGACAAGATTTTGAGACCACCCCAAGATATTGTTCGCATTGATGGGACCAAACATTTCCCTGATTTTACTTGGTCTGATTTGCTTCTCTTCACACAAAAACATTATAGAGCCGATGAAGCTACACTCCACAACTTCACCAACTGGTTCCTTTCTTCCAAAACCAATAAATAG 1092 0.4341 MDSSLLLSTLNQETVIGVEPPHLPTNFVWPMEDLVDAHGELEVPVVNLSGFLTGDDEATWCVAKLVHRACLSHGFFQVINHGVDPALIAQAYAQMDKFFRVPTQRKLSFSKKPGLLWGYSGAHVDRFSSKLPWKETLSFPYYDHTFEPVVANYFNTTLGEDFQQTGVTFQKYCKAMKELGVKLTELLAISLGLKDRLHYKELFEEGCSIMRCNYYPPCHQPSLTLGTGPHCDPTSITILHQDQVGGLQVFADKRWKIVQPRSDAFIVNIGDTFTALSNGRYKSCLHRAVVNSYKERRSLAFFLCPKEDKILRPPQDIVRIDGTKHFPDFTWSDLLLFTQKHYRADEATLHNFTNWFLSSKTNK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02992 363 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 359 - -
Aip07g02992 363 Pfam 2OG-Fe(II) oxygenase superfamily 208 305 IPR044861 -
Aip07g02992 363 PANTHER GIBBERELLIN 20-OXIDASE 18 359 - -
Aip07g02992 363 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 144 IPR026992 -
Aip07g02992 363 Gene3D - 10 336 IPR027443 -
Aip07g02992 363 SUPERFAMILY Clavaminate synthase-like 13 344 - -
Aip07g02992 363 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 305 IPR005123 -
Aip07g02992 363 PRINTS Isopenicillin N synthase signature 66 83 - -
Aip07g02992 363 PRINTS Isopenicillin N synthase signature 230 251 - -
Aip07g02992 363 PRINTS Isopenicillin N synthase signature 265 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02992 Aip-Chr7 116760025 116764059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02992 15 303 Glycosyltransferase AT5G59530 30.000 1.36e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02992 K05282 - gmx:100776707 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02992 07 116760025 116764059 Aip07g02992 07 116760025 116764059 ECH