Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02976 ATGGTTAAGATAGTGAAGAAGAAGCCTGACTTAAATGTGAGGGAAAAGATACTGATTTTGATTGATACATGGCAAGAAGCTTTTGGGGGCCCAACCGGTGTTTACCCCCAATACTATGCAGCATATAATGAATTAAAGGCTGCTGGAGTTGAATTTCCACCACGAGCAGAGAGCAGTGTGCCATTTTTCACTCCTCCTCAAACCCAGCCAGTTGTTCATTCAGCTGTAGAATATGATGATGATGCTGCTATTCAGGCTTCTCTTCATTCGGATGAATCTGGCCTTAGTGTGCCAGAGATTCAAAATGCTCAAGGACTAGCTGATGTTTTGATGGAAATGCTGAATGCCCTGAATCCTAAAGATCCCAAGAGCGTGAAAGATGAATTCATTGTTGACCTTGTGGACCAGTGCCGATCTTATCAAAAGCGTGTGATGCTTCTTGTGAACAATACTGCGGATGAGCAGCTTTTAATTCAGGGATTGGCACTGAATGACAGCCTTCAGCGAGTACTCCTCAAACACGACAATATTGCGAACGGAACTGTCGATACAGGTGCAAGAGCAACAGAAACTCCAGCTCTGCCACTTGTAAATGTAAATCACGAGGATGATGATGAGTCAGAGGATGATTTTGCTCAACTAGCCCATAGGTCATCACGCGATACTAATGCACAGAACCGGAAACCAGCCTACGACAAGGCAGAACCAGGGAGGTTTAACTCATTTCTTCCTCCACCACCACCATCAAAGAATCCGGTCTACTCTGACACAGGCATGGTTGACTATCTCAGTGGTGATGCATATAAAGCAGAGGGAGGATCCTCTGAAAACTCAAAGCAGACTCCGTTGGCAGCTCCGACTAATCCCACCGCATCAACTATTCCTGCACGGTCCTCTTCACCTCCTACTCATGCCAGGAGTACTTCACCAATTGTCAGTGGCCAGCCTGTGTATGATGAGCCATCTCCCACAAAAAAGTATTCAGAAGATCTGCCTCCAGCTCAATGGGACAGGGACACACCATCTACTGGGTTCCTTCCACCGCCACCTGCGAAGCACAACCAGAGACAACAATTTTTTGAGCAACAAAGTGGAACAACTTATTCAAGTGGTGGATCCAGTTCCTCTTATGATGGTTTGGTTGGGCAAACTCAGAATCTGTCTCTAAATCCATCCACCCCAACCAAACAACAGAAGCCAGAAGATGTCCTGTTCAAAGATTTGGTTGATTTTGCCAAATCCAAAACCTCTTCATCTTCCAAACCAAATAATAGGTCATATTGA 1284 0.4533 MVKIVKKKPDLNVREKILILIDTWQEAFGGPTGVYPQYYAAYNELKAAGVEFPPRAESSVPFFTPPQTQPVVHSAVEYDDDAAIQASLHSDESGLSVPEIQNAQGLADVLMEMLNALNPKDPKSVKDEFIVDLVDQCRSYQKRVMLLVNNTADEQLLIQGLALNDSLQRVLLKHDNIANGTVDTGARATETPALPLVNVNHEDDDESEDDFAQLAHRSSRDTNAQNRKPAYDKAEPGRFNSFLPPPPPSKNPVYSDTGMVDYLSGDAYKAEGGSSENSKQTPLAAPTNPTASTIPARSSSPPTHARSTSPIVSGQPVYDEPSPTKKYSEDLPPAQWDRDTPSTGFLPPPPAKHNQRQQFFEQQSGTTYSSGGSSSSYDGLVGQTQNLSLNPSTPTKQQKPEDVLFKDLVDFAKSKTSSSSKPNNRSY 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02976 427 MobiDBLite consensus disorder prediction 216 234 - -
Aip07g02976 427 MobiDBLite consensus disorder prediction 355 399 - -
Aip07g02976 427 ProSiteProfiles GAT domain profile. 91 179 IPR004152 GO:0035091|GO:0043130
Aip07g02976 427 MobiDBLite consensus disorder prediction 271 315 - -
Aip07g02976 427 Gene3D - 1 63 IPR008942 -
Aip07g02976 427 ProSiteProfiles VHS domain profile. 1 53 IPR002014 GO:0035091|GO:0043130
Aip07g02976 427 CDD GAT_GGA_like_plant 99 177 - -
Aip07g02976 427 SUPERFAMILY GAT-like domain 57 180 - -
Aip07g02976 427 Pfam GAT domain 106 179 IPR004152 GO:0035091|GO:0043130
Aip07g02976 427 PANTHER TOM1-LIKE PROTEIN 1 426 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aip07g02976 427 Coils Coil 424 427 - -
Aip07g02976 427 PANTHER TOM1-LIKE PROTEIN 4 1 426 - -
Aip07g02976 427 MobiDBLite consensus disorder prediction 216 404 - -
Aip07g02976 427 SUPERFAMILY ENTH/VHS domain 1 54 IPR008942 -
Aip07g02976 427 Gene3D - 87 185 IPR038425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02976 Aip-Chr7 116526264 116531141 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02976 - - gmx:100792343 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02976 07 116526264 116531141 Aip07g02976 07 116526264 116531141 ECH