Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02946 ATGACAGGTTGGAGGACATACCGCAGGCCGGATGATAAGTCCGGTGGACATGGTGTTGGATGGAGTCCTATTATACCATACGCTTTCCGAGTACCTGAGGAATGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGCACTGAGATAGATTTGAGATTTGCAAACTCTAAGCAAGGGCATCTGTTTGTCGTTGTTGCTCCTGTTCTTAGATTTGCTGATAATCTTGGTGATGATGCTACAATAGAAAAAATCGGACCTCCAGAGAAAGTCATCAATGCATTTGGTCCGGAAATGATTGGGGACAATGTCGAGGGAAAGGTTCTAAGTTCAGACGTAGCAGAACACAATGGAAGAACATACTACCAGTTTGAGCTAGAGCCTCCTCATATTTTTATTACTGCTACTGCAGCTGGAAATCGCTTGTACCTGTTTGGTGTAACAGGCAGTGGTCTTCAGTGGAAGAGACACTACAATGATTTGAAGAAGATAGCTGAGTCTTTTCGAGTTGTATAA 516 0.436 MTGWRTYRRPDDKSGGHGVGWSPIIPYAFRVPEEWEEVPVSIADLGGTEIDLRFANSKQGHLFVVVAPVLRFADNLGDDATIEKIGPPEKVINAFGPEMIGDNVEGKVLSSDVAEHNGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYNDLKKIAESFRVV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02946 171 Pfam PsbP 27 170 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aip07g02946 171 PANTHER - 2 171 - -
Aip07g02946 171 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 2 171 - -
Aip07g02946 171 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 24 171 - -
Aip07g02946 171 SUPERFAMILY Mog1p/PsbP-like 19 170 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02946 Aip-Chr7 115702525 115705728 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02946 - - adu:107460545 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02946 07 115702525 115705728 Aip07g02946 07 115702525 115705728 ECH