Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02940 ATGGTATCACTTACATGGAACCATAATGGTTTTCATCACAGACAACCCAAAGTCTCCAAGCCACATGCACGTAAATCTACACTTCCAATAAATGCACCTTCTTCAACACTAAGAACTCCTAAAACATACTCACTGCCACCAGAGAAGATTGAAGTTTTCAAGTCACTTGAGGGTTGGGCTTCACAGTGCATCTTGCCACTTGTGAAGCCCGTTGAGCAAAGCTGGCAGCCCGTTGATTTTTTACCGGACTCGTCCCTGCCGGTGGAGGACTTCAACAATAAGGTGAGGGACCTAAGAGATCGGACAGCTGAACTTCCAGACGATTATTTAGTGGTTTTGGTGGGTGATATGATCACGGAGGAAGCTTTGCCCACTTATCAAACAAGGTTGAACCAGCTCCATGGCGTTGCGGATAAGACGGGCTCATGCACAAGCCCGTGGGCAGTGTGGTCTCGGGCTTGGGCCGCAGAAGAGAATAGGCATGGAGACTTGCTTCAAACTTATTTGTACCTTTCAGGTCGAGTTGATATGCGTATGATTGACCGGACCATCCATTACTTGATTGCAGCTGGCATGCAATGGAATATAGACAAGAATCCATATATGGGATTTGTGTACACATCATTTCAAGAACGAGCTACTTTTATTTCACACGGCAACACGGCTCGGCTTGCTAAGAAAAACGGTGATTCAGTGCTTGCGCGAATATGTGGCACCATTGCTGCAGATGAAAAGCGTCACGAGAATGCATACGTAAAGATCGTTGAGAAGCTTCTAGAAGTGGATCCTACAGAGACAATGGTAGCAATATCAAACATGATGCGCAAGGGAATCACAATGCCAGCACACTTGATGCAGGATGGGAAGGATCCACACCTCTTTGATCACTTCTCTGCAGTGGCACAACGACTTGGTGTCTACACAGCCGCTGATTATGCTGACATTTTGGAGTTTTTGATCCAACGGTGGAAATTAGAGAAGATACAGGATTTAACGACTGAAGGAAGACGTGCACAGGATTTTGTGTGTGGTCTAGCACCCAGGATTAGAAGGTTGCAAGAACGAGCTGATGAAAGAGCGCGTAAAACAGAGCCACATAGTGTCAAATTTAGTTGGATTTTCAATAAGGAAGTGTCATTGATATAA 1146 0.4546 MVSLTWNHNGFHHRQPKVSKPHARKSTLPINAPSSTLRTPKTYSLPPEKIEVFKSLEGWASQCILPLVKPVEQSWQPVDFLPDSSLPVEDFNNKVRDLRDRTAELPDDYLVVLVGDMITEEALPTYQTRLNQLHGVADKTGSCTSPWAVWSRAWAAEENRHGDLLQTYLYLSGRVDMRMIDRTIHYLIAAGMQWNIDKNPYMGFVYTSFQERATFISHGNTARLAKKNGDSVLARICGTIAADEKRHENAYVKIVEKLLEVDPTETMVAISNMMRKGITMPAHLMQDGKDPHLFDHFSAVAQRLGVYTAADYADILEFLIQRWKLEKIQDLTTEGRRAQDFVCGLAPRIRRLQERADERARKTEPHSVKFSWIFNKEVSLI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02940 381 Pfam Fatty acid desaturase 48 374 IPR005067 GO:0006631|GO:0045300
Aip07g02940 381 MobiDBLite consensus disorder prediction 1 35 - -
Aip07g02940 381 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 32 380 - -
Aip07g02940 381 SUPERFAMILY Ferritin-like 38 379 IPR009078 -
Aip07g02940 381 ProSitePatterns Fatty acid desaturases family 2 signature. 298 317 IPR005803 GO:0006633|GO:0016491
Aip07g02940 381 Gene3D Ribonucleotide Reductase, subunit A 32 380 IPR012348 GO:0016491
Aip07g02940 381 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 32 380 IPR005067 GO:0006631|GO:0045300
Aip07g02940 381 CDD Acyl_ACP_Desat 48 356 IPR005067 GO:0006631|GO:0045300
Aip07g02940 381 PIRSF Dlt9_acylACP_des 3 380 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02940 Aip-Chr7 115657110 115659450 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02940 41 380 Acyl Lipid Metabolism Gene Families AT1G43800 70.674 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02940 K03921 - csin:114292502 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02940 07 115657110 115659450 Aip07g02940 07 115657110 115659450 ECH