Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02893 ATGGGTTCATCAGAGGACAAATACCGCACGTTTTTGCATCAAGAGCAAGAGAAGAACACCAAATGGAGATTTGGTGCCCCTCCTAATTATGATGCTGTCAACAAGCTTTTTGAAGAGGGCAGAACCAAGGAATGGGCTCCTGGATCTCTTGAAGAGCAGGTGCAGACTCTAGTCAAGAATTGGGAAATGGAAATTTTCCATAAACTTGATGTAAATCAATACAGATCACTAGACCCACAGAAATACACCTTCAGCCTCAATGGAAGGAATGCTATGACGTTGGAAGAGAATAAGAAGCTTGGAGGTGGTGGGTATAATGCACTGCTGCAAACATCGATGCCACAAGAACTAAGGGTATACGACCCAAATGAAGAAACAGCAGATTCATCTCACAAAATTTTCACCACCACTTTCCCACGTGGTTTTGCTCTGGAGATTCTTCATGTCTATTCTGGACCACCCGTTATTATTTACAAGTTCAGACACTGGGGATTCATGGAGGGTCCTTTCAAAGGCCATGCCCCAACTGGTCAAAAAGTTGAACTTTTTGGAATCGCCATTTTCACGTTGGATGAGGCCTCGAAGATAGTGAAGGTGGAGTTCAATCCAACAATAATAATAATAATAAATTCTTCCTCTGCCTATCAACCTTTCCCTTCTCATTCTCACTACCAAAAATATTATCACTACAATCTTGTTATCACTGATAAGGACCAATTCCGTAATTTCCTTCTTGTTTCATTAACAATCATTCTTGCCATCATAGCATTGGTTCTAATCCTGCACTTTTTACCCCATAAGAACAAGCATCAAGGAACTTCAATCAATTTCAAACTCGCAATTAACCATGCTCTAACTTTTTATGATGCACAAAAATCTGGACACTATCCGAAGAACAGCCCAGTGAAATTTCGAGGCGATTCAGGATTAGGCGATGGAAAATCAGCAGATACTGATCTTGTTGGTGGATTCTATGACTCTGGCAATAACATTAAATTTACTTTCACCACAGCTTATACTACAACCTTGTTGAGTTGGAGTGTGATGGAATATCATAGTAAATATGCTGATCTTGGTGAGCTTCAACATGTTAGAGACATAATCAGATGGGGAAGTGACTATCTCCTTAAGGTGTTCATTCTCCCAACTTCAACATCTAAATCCAACCTTACAATATACTCTCAGGTTGGAAATACCATTAGTGATAAGGGAGAGCCAAAAAATGATATAAGCTGCTGGCAAAGACCTGAAGACATGGATTATGCAAGACCAGTTTCAATTTGTGACAGTTCTGCTTCAGATTTAGGAGGTGAAATTGTTGCAGCATTATCTGCATCATCTATGGTATTAAAAAATGACACAGAATACTCAAAGAAACTAGTCAAAGCAGCAGAAACTCTACACAAGTTAGTCACAAGTGAAGATCCAAAGAAGCAAGGAACTTACACAATGGTTGATGCATGTGGAAAACAAGCAAGAGATTTCTACAAATCATCAAGTTACAAAGATGAATTGGCATGGGGAGGAACATGGTTGTTTCTTGCTACTGGAAACTTAACTTATCTTGATTATGCTACTGAGACTTTTAAATCTGCCAAGAGCAATGAATCAGATTTTGATAATGGAGCCTTTGATTGGAACAACAAGCTCAATGCAGTCGCGGTTTTGCTAACAAGAATTCGATACTTTCGTGATCCCGGAGGATTGTATGAACATGCTTTGAGGCTCTCATCAAACTCAACACACTCCCTCATGTGCTCTTTGCTGTTCAATGATTTTAGCAGGACACCTGGTGGATTGATTATCATGAAAGATGATAATGGGCCATTACTAGAGTATGCTGCAACAGCATCATTCCTCAGTAAATTGTATAGTGATTATCTTCATCATCTCAAGTTCTCTGGTGCAAAATGCAAGAGTAATGTGTTTTCGGTTAACTACATATTGGGACAGAATCCTTTGAAGATGAGTTACTTAGTGGGATATGGTGACAAATTTCCAGTGCATGTTCATCACAGAAGTGCATCAATTCCATGGGATGATAAGAAGCATTATAGTTGTGATGGTGGCAAGAAATGGCTCAACTCGAAGGATCCGAATCTGCAAGTTCTTGTTGGAGCCATGGTGGGAGGGCCAGACATGCATGATGGTTTCATAGATCAAAGGAACAATTCAAGGTTCACTGAGCCAAACATAGCAAGCAATGCTGGTTTAGTTGCAGCACTTATTGCACTTTCTGATAACTCAAGTGGCTTGAAGGATTCATTTTGA 2271 0.3976 MGSSEDKYRTFLHQEQEKNTKWRFGAPPNYDAVNKLFEEGRTKEWAPGSLEEQVQTLVKNWEMEIFHKLDVNQYRSLDPQKYTFSLNGRNAMTLEENKKLGGGGYNALLQTSMPQELRVYDPNEETADSSHKIFTTTFPRGFALEILHVYSGPPVIIYKFRHWGFMEGPFKGHAPTGQKVELFGIAIFTLDEASKIVKVEFNPTIIIIINSSSAYQPFPSHSHYQKYYHYNLVITDKDQFRNFLLVSLTIILAIIALVLILHFLPHKNKHQGTSINFKLAINHALTFYDAQKSGHYPKNSPVKFRGDSGLGDGKSADTDLVGGFYDSGNNIKFTFTTAYTTTLLSWSVMEYHSKYADLGELQHVRDIIRWGSDYLLKVFILPTSTSKSNLTIYSQVGNTISDKGEPKNDISCWQRPEDMDYARPVSICDSSASDLGGEIVAALSASSMVLKNDTEYSKKLVKAAETLHKLVTSEDPKKQGTYTMVDACGKQARDFYKSSSYKDELAWGGTWLFLATGNLTYLDYATETFKSAKSNESDFDNGAFDWNNKLNAVAVLLTRIRYFRDPGGLYEHALRLSSNSTHSLMCSLLFNDFSRTPGGLIIMKDDNGPLLEYAATASFLSKLYSDYLHHLKFSGAKCKSNVFSVNYILGQNPLKMSYLVGYGDKFPVHVHHRSASIPWDDKKHYSCDGGKKWLNSKDPNLQVLVGAMVGGPDMHDGFIDQRNNSRFTEPNIASNAGLVAALIALSDNSSGLKDSF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02893 756 Pfam Glycosyl hydrolase family 9 279 742 IPR001701 GO:0004553|GO:0005975
Aip07g02893 756 Gene3D - 112 202 - -
Aip07g02893 756 PANTHER ENDO-1,4-BETA-GLUCANASE 215 751 - -
Aip07g02893 756 Gene3D - 273 749 IPR012341 GO:0005975
Aip07g02893 756 SUPERFAMILY NTF2-like 130 201 IPR032710 -
Aip07g02893 756 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 647 673 IPR018221 -
Aip07g02893 756 PANTHER ENDOGLUCANASE 215 751 - -
Aip07g02893 756 SUPERFAMILY Six-hairpin glycosidases 275 747 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02893 Aip-Chr7 114992581 114997979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02893 219 746 Glycoside Hydrolase AT5G49720 44.364 9.71e-133 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02893 K01179 - gmx:100805472 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02893 07 114992581 114997979 Aip07g02893 07 114992581 114997979 ECH