Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip07g02883 | ATGTACCGTCCGCCACCGTCGTCTTCGTCGACCTCCATGTACGGCCCGCAACCTCTGTACCCGAAGATCGGTCCCCACCCTCACGCCGCCGCCGGCCGCCCCTCGCCCTATCAGCAGAGTCCTGCTCCTCCTCCGTCCTCTTCTTCTGTTGTTGAGTGTTTCTTTGTGAGGTTGTTCTTCTCTATTTACCCTCCTCATTTATCACCACATGTTGGAGATATTCCGCGTAGCAACTTCCAGTTTGACTTTGGATTGGAGAGAAAAATTATGGCTGAAGCACAGAAGGAAAACCCAAATTGGAGCAAATTTGGGACAGAAAATCTGCCTAAGGTTTCTGAATCAATATCGTCATCATCGTCACCAAGGGTTTCTGTTGCAGATCCTGTTGTGAGCAAATATATTGCCATGGGTCTCAACCGAGAGGCCGTTCCCATAGCTGTTGCAAATTATGGGGATAATCCAACTAAGGTTCAGGGATTTGTCAATGCTTACACCCTTCTGCGTGAAATGGGATTTTCGTCCAACAGCGTTACTGAAGCTCTGATTATGCATGACAATGACACAGACAAGGCACTAGCACATTTCCTTAGTGGCTCATCATGA | 603 | 0.4842 | MYRPPPSSSSTSMYGPQPLYPKIGPHPHAAAGRPSPYQQSPAPPPSSSSVVECFFVRLFFSIYPPHLSPHVGDIPRSNFQFDFGLERKIMAEAQKENPNWSKFGTENLPKVSESISSSSSPRVSVADPVVSKYIAMGLNREAVPIAVANYGDNPTKVQGFVNAYTLLREMGFSSNSVTEALIMHDNDTDKALAHFLSGSS | 200 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip07g02883 | 200 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 167 | 198 | IPR015940 | - | |
| Aip07g02883 | 200 | PANTHER | LD44032P | 5 | 200 | IPR038870 | GO:0000813|GO:0043130|GO:0043162 | |
| Aip07g02883 | 200 | Gene3D | UBAP1 SOUBA domain | 123 | 200 | IPR042575 | - | |
| Aip07g02883 | 200 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Aip07g02883 | 200 | SUPERFAMILY | UBA-like | 154 | 198 | IPR009060 | GO:0005515 | |
| Aip07g02883 | 200 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Aip07g02883 | 200 | CDD | UBA2_UBAP1_like | 160 | 196 | - | - | |
| Aip07g02883 | 200 | PANTHER | - | 5 | 200 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip07g02883 | - | - | aprc:113852741 | 238.039 |