Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02874 ATGGTGGATTCAGAACGAGTCCAAAATCCATGGATGGCTTCCTCTTCCGACCAAGTTGCTTCAATTTCACAAGCTGAATTGAGTGCTCAAGCTCCGTTGTTGCTCGAATCTCCTTCTCTTCAGCCTCCGCCGTCGCCGCCGCAATCGTCTGACGCTAACAAATTGGGAATTGGCGAACGAGCTTTCTCTGCCGCAGGCGCCGCCTTCATCTCCGCCATTATTGTTAATCCCCTTGATGTTGCCAAGACAAGGTTGCAAGCACAAGCCGCAGGGGTGGCTTATTCTCATCGCCTCAGTAATATGACCACTCGTATGGCTTGTTTTGGCCCTAACATGATGTTTGCTGATTTAAGATGTTCTCCTTCGTGTTCCCGGGCTGGAATCCATGGCACAATTTCGCTTTGTCCTCCTGAGTGTTTTCGGTACAAGGGAACATTTGATGTCTTGTATAAAGTTGTACAACAGGAAGGATTTTCAAGGCTGTGGAGGGGTACAAATGCAGGCCTGGCACTTGCTATACCAACCGTGGGAATTTACCTTCCATGCTATGACTTGTTCCTCAACTGGTTGGAGGAATTCACTGCAAGAAGTGCTCCAATGACAACTCCATATGTACCTTTAGTGGCTGGTTCATTGTCACGCTCCCTTGCATGTGCAACTTGTTATCCTATTGAACTCGCCAGAACTCGTATGCAGGCGTTTCAAGAGACTCAAGTTGGTAAAAAGCCTCCTGGAGTTTTTCAGACTCTTGTAGGTGTTGTTTCACATGTCAAGGGTTCAAATAGTCCTCCTCAGAACACCTGGCAAGGTTATCGTGTTCTGTGGACTGGTATGGGAGCACAACTTGCCCGAGATGTACCCTTCTCTGCAATTTGTTGGTCAATTCTAGAACCTACTAGAAGAAAACTCCTTAGCCTGGTAGGGGGTGATGATGCCGATGCATTGGGTGTTCTTGGGGCGAATTTTTCAGCTGGTTTTGTTGCTGGAACTCTAGCAGCAGGAGCTACATGTCCGCTAGATGTAGCGAAAACTCGAAGGCAAATAGAGAGGGATCCGGTGAGGCAACTGAGAATGACCACAAGACAAACATTGATGGAAGTTTGGAGAGATGGAGGCATGAAGGGACTGTTCACAGGTTTAGGTCCACGAATTGGAAGAGCTGGCCCCTCCGTTGGAATAGTGGTTTCATTCTATGAAGTTGTCAAGTTTGCTCTTCATTCACAACGCTAA 1230 0.4756 MVDSERVQNPWMASSSDQVASISQAELSAQAPLLLESPSLQPPPSPPQSSDANKLGIGERAFSAAGAAFISAIIVNPLDVAKTRLQAQAAGVAYSHRLSNMTTRMACFGPNMMFADLRCSPSCSRAGIHGTISLCPPECFRYKGTFDVLYKVVQQEGFSRLWRGTNAGLALAIPTVGIYLPCYDLFLNWLEEFTARSAPMTTPYVPLVAGSLSRSLACATCYPIELARTRMQAFQETQVGKKPPGVFQTLVGVVSHVKGSNSPPQNTWQGYRVLWTGMGAQLARDVPFSAICWSILEPTRRKLLSLVGGDDADALGVLGANFSAGFVAGTLAAGATCPLDVAKTRRQIERDPVRQLRMTTRQTLMEVWRDGGMKGLFTGLGPRIGRAGPSVGIVVSFYEVVKFALHSQR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02874 409 Gene3D Mitochondrial carrier domain 131 409 IPR023395 -
Aip07g02874 409 PANTHER FI19922P1-RELATED 1 408 IPR045315 GO:1990542
Aip07g02874 409 PANTHER BNACNNG35730D PROTEIN 1 408 - -
Aip07g02874 409 ProSiteProfiles Solute carrier (Solcar) repeat profile. 316 404 IPR018108 -
Aip07g02874 409 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 302 IPR018108 -
Aip07g02874 409 MobiDBLite consensus disorder prediction 33 54 - -
Aip07g02874 409 Gene3D Mitochondrial carrier domain 34 115 IPR023395 -
Aip07g02874 409 Pfam Mitochondrial carrier protein 320 406 IPR018108 -
Aip07g02874 409 Pfam Mitochondrial carrier protein 55 190 IPR018108 -
Aip07g02874 409 Pfam Mitochondrial carrier protein 203 303 IPR018108 -
Aip07g02874 409 SUPERFAMILY Mitochondrial carrier 59 400 IPR023395 -
Aip07g02874 409 ProSiteProfiles Solute carrier (Solcar) repeat profile. 55 189 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02874 Aip-Chr7 114733013 114736306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02874 269 409 Organic Solute Cotransporters AT3G55640 30.556 5.70e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02874 K15119 - gmx:100810960 634.024