Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02854 ATGAAAAGGAATGCGGGGTATTTTAGTCCAAATGGTGTGAGGGTAGGGTTCACCCCGAAGTTGTTTGAGTACCAGAGATGGTTACTCGTTGAACGCAGAGCTGCTGAATTGCTTCTATATCTTCGACCAAACTTAGATACACAACAACGTCGATACGACATCATTTCTTACTTGCAACGCCTCATCACCACTCACTGCTCTACCTGTTGTCAGGTATTCCAAGTAGGGTCTGTACCATTGAAGACTTATCTACCTGATGGAGATATTGACCTAGCAGCATTCACTAATAACAATTGCGAAACTTTGATAAATGAGGTTCGTGATCTTTTACATGCTCAGGAGAAGATACTCGATGCTCAATTTCGTGTCCAACATGTTCAGTATATACAGGCTGAGTCATTGTTTCTTCAATACTTGTCAACAAACAATCTCACTGGAGAGGTTCCAGGTGAGTTTGGAAACTTGAGAGCGTTACAGAACTTGAGTCTCTCTTGGAACCAATTTCATGGTAGTACTATTCCTAGTACTATGTGTTCCAATAATGCATCAAAGTTGGTGCCTTCGAGTATTTCAGACTGTGGGCTTCATGGTGTGATTCCAATTGAGTTAGCTCAGTGTGTATCATTGAAGGTTCTTGATTTAGCTAATAAATCTCTCACTGGTTCAATCTCTCCCTTCATTAGTGGGAACCTTACAAATTTGGAAGAAATTTATTTGTACAGAAACAAGTTGAATGGTTCTTTTCCTAGAGAGATTGGGAAGCTTGGCAAGTTGCAAAGTTTATCCCTTTTTGAGAATCAGTTATCTGGGCAGATACCTTTGGAGATTGGTAACTGTTTAGGGTTGCAATTGATTGATTTTTTTGGAAACCAACTCAGTGGTGGGATTCCAATCACTATTGGAAGGCTTAGAGAGTTGAATTGGAATAATAACCTTGAGGGGAAAATTCCTTCCACACTTGGTAACTGTCAAAAGATGATGACTGATCTGGCAAATAATCAGCTATCAGGTTCAATTCCCGCAACATTAGGGTTCCTGAGAGGATTGGATCAGCTCATGCTTATAAATGTAGCAAACTTGACAAGAGTGAACCTTTCAAGGAACAAGTTTAATGGTAGTTTGGCTCGATTGTGTAGCTCAAGTTCATTTCTTTCCTTTGATGTCAAGATAGTAAAGTTCATAGTAGAAAATTTTGTAGTGGACATATCTTTTAATCAGCTTAGTGGCTTATGTACACTTTGTTTTCTTGACGAGGTTGACAACGTGATTGGACATAATCACTTGTTCAAAAGGAGTGTGATATTGATAAAAGCTTGGTGTTACTATGAGAGCCAAATCTTGGGAGCATATTATAGATTAATGTCAACCTATGCACTCGAAACTTTAGTCATATACATATTTCATGTTTACAATAAGCCATTTTCTGGTCCAGTAGAGGTACTTTTCCGATTTCTGGAGTTCTTTAACAAATTTGATTGGGATAACTATTGCATTAGCTTGTGGGGACCAGTGCATAAAGAGTGTGTTCCGAAGATGATGAGAGCGGAAGCTCCAAGAGGGGATAGGGAAGTGTTGCTGCTGAGTGAAACGTTTCTGAGAAGTTCTATAAGCTGTTACAGTGTGCCAAGAATCAATGAAAACAATAATAACGTTGAAGAGCGACCTTTTGTTTTCAAATGCATCAATATTGTTGATCCCTTGCGTCCCAACAACAACTTGGGCCGAAGCATTAGCAGGGAAGAGAATGTGATAGCAGAATTTGATTCCTTCTTCAAGAACACATGGAACAGAAGTGGCAAAGGTTACTGGATACCATCATTTCATGAGAATAATAATTCTTCATCAAAACATGTCAATGAAATTGGAACCTCTTTTGATGCTGCACCATCATCATGGAGCTCAAAGGATCACACAAATAATAATAATAATAATAATGCAGCCATGGTTACTGATCAAGGTTCTCATCATCATCATTCTTCTTCAATGAATGAATCAGGAGATAGTGCTTCAAATGTTATCATCAACAATGAACTTTCCGGTGTTAACATGCCTTGCTCTAACCCTGATGCACTACCTCTGTATCTTCTTGAGCAACAAATCAATAATTTGAAGCTAGGTAACAACAATAATGATGATAATAATAATAATAATCTCCAAGCTCAACAAGAAAAGAGTGATAACCAAGGCTTATTACCTGGTCCAATTAATAGTAATAATAATAATGTGACACCATTTTCATTCCCTATGGCTATGAACATGGAAAGTACATTATTAGTTGATGTTTTGGAGGGTGATTTTGCAAGCCATTGGAAGAACATGCAGAATGCAAGACTAAGTTTAGATGGAAACTTGCAGGGTCCATTTTGTAGTTCTAGTTCACCTGTAATACCACCACTTCAGTCACAATTATTGTTGGGAAATTTTCCTCTTCTTACTTGTGCTGGTATTGTGCCAAATATGATGCTACCTGCTTCTGGTAACATGAGTCAGAGTCATCCTTTGCTTCCTATGATGCAAAATTCTGGACCCAATTGTGATAGTGTTCCATTTGGTTTTGGTGAGCATCCAAGACATCAGGTTGGAACTGGGACATTTATTCCAGATCCAGAGAGTTACAAGCTAAGGGTTAAATTTCAAGCAAGAAGGCGTAATTATGACCGTCCTAGGGAAGGTAGGTTCAATTACGAATATGAAAGGACAAATAGTGGTGGCGCTGATTATAATTATGGGAACCTTGTATGGAAGCCAGTGGAGACTAAGCGTTACATGAATATTGGAAACCATAAAGAAGCATCTAGTTCTTCAACTGCTGGTACAAATTCTGAAGAGGATTTTGCACATTCTTCTTCTAATCAGCCCTTATCCCCCAATATTAGCGGGTAA 2883 0.3857 MKRNAGYFSPNGVRVGFTPKLFEYQRWLLVERRAAELLLYLRPNLDTQQRRYDIISYLQRLITTHCSTCCQVFQVGSVPLKTYLPDGDIDLAAFTNNNCETLINEVRDLLHAQEKILDAQFRVQHVQYIQAESLFLQYLSTNNLTGEVPGEFGNLRALQNLSLSWNQFHGSTIPSTMCSNNASKLVPSSISDCGLHGVIPIELAQCVSLKVLDLANKSLTGSISPFISGNLTNLEEIYLYRNKLNGSFPREIGKLGKLQSLSLFENQLSGQIPLEIGNCLGLQLIDFFGNQLSGGIPITIGRLRELNWNNNLEGKIPSTLGNCQKMMTDLANNQLSGSIPATLGFLRGLDQLMLINVANLTRVNLSRNKFNGSLARLCSSSSFLSFDVKIVKFIVENFVVDISFNQLSGLCTLCFLDEVDNVIGHNHLFKRSVILIKAWCYYESQILGAYYRLMSTYALETLVIYIFHVYNKPFSGPVEVLFRFLEFFNKFDWDNYCISLWGPVHKECVPKMMRAEAPRGDREVLLLSETFLRSSISCYSVPRINENNNNVEERPFVFKCINIVDPLRPNNNLGRSISREENVIAEFDSFFKNTWNRSGKGYWIPSFHENNNSSSKHVNEIGTSFDAAPSSWSSKDHTNNNNNNNAAMVTDQGSHHHHSSSMNESGDSASNVIINNELSGVNMPCSNPDALPLYLLEQQINNLKLGNNNNDDNNNNNLQAQQEKSDNQGLLPGPINSNNNNVTPFSFPMAMNMESTLLVDVLEGDFASHWKNMQNARLSLDGNLQGPFCSSSSPVIPPLQSQLLLGNFPLLTCAGIVPNMMLPASGNMSQSHPLLPMMQNSGPNCDSVPFGFGEHPRHQVGTGTFIPDPESYKLRVKFQARRRNYDRPREGRFNYEYERTNSGGADYNYGNLVWKPVETKRYMNIGNHKEASSSSTAGTNSEEDFAHSSSNQPLSPNISG 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02854 960 Pfam Leucine rich repeat 208 268 IPR001611 GO:0005515
Aip07g02854 960 SMART LRR_typ_2 155 180 IPR003591 -
Aip07g02854 960 SMART LRR_typ_2 357 380 IPR003591 -
Aip07g02854 960 SMART LRR_typ_2 231 254 IPR003591 -
Aip07g02854 960 SMART LRR_typ_2 255 279 IPR003591 -
Aip07g02854 960 SUPERFAMILY L domain-like 182 384 - -
Aip07g02854 960 MobiDBLite consensus disorder prediction 705 737 - -
Aip07g02854 960 SUPERFAMILY Nucleotidyltransferase 34 123 IPR043519 -
Aip07g02854 960 MobiDBLite consensus disorder prediction 928 960 - -
Aip07g02854 960 Gene3D Ribonuclease Inhibitor 119 431 IPR032675 -
Aip07g02854 960 Gene3D - 475 602 - -
Aip07g02854 960 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 23 132 - -
Aip07g02854 960 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 580 953 - -
Aip07g02854 960 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 387 580 - -
Aip07g02854 960 MobiDBLite consensus disorder prediction 627 656 - -
Aip07g02854 960 SUPERFAMILY PAP/OAS1 substrate-binding domain 428 580 - -
Aip07g02854 960 MobiDBLite consensus disorder prediction 627 668 - -
Aip07g02854 960 SUPERFAMILY L domain-like 138 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02854 Aip-Chr7 114295847 114302904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02854 104 409 Receptor kinase-like Gene Family AT5G56040 31.564 1.23e-36 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02854 - - adu:107460535 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02854 07 114295847 114302904 Aip07g02854 07 114295847 114302904 ECH