Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02812 ATGTCGTCTTCTTCACTTTCGTTCGCAGCGGCTCCGGCTTGGTCTGCGTGCACTCTACCGTCGAATATCGCAAGCAGCAGGACGCAGCTCAATGTGCGAACTGTGGCGAAGGCGAAACCGATGAGCTTCTTCGGTACTCGTTTGCGTTCGAGCTGCAGGTCACTCGGTTCGGAGCGGCTGCACGTGTGGCGGTCGCAGGGGCCAGGGAGGTCGCCGGAGCTGAGGGTGGTGGTCCGGTCGGCATTGTCGGCTGTACCAGAGAAGCCGATGGGGCTTTACGATCCAGCTATGGATAAGGACTCATGCGGAGTGGGGTTCGTAGCGGAGCTGTCCGGCGAGGGCAACCGTAAAACGGTGACAGATGCTTTGGAGATGTTGGTGCGCATGACGCACAGGGGAGCTTGCGGGTGCGAAGCAAACACTGGAGACGGAGCCGGGATTCTTGTGGCTCTACCTCACCAGTTTTACACGGAGGTCGTGGATTTTGAGCTTCCACCTCCTGGAAAATATGCAGTTGGCATGTTTTTCTTGCCCACCTCCGACAGTCGTAGGGAAGAGAGCAAAAATGTATTTAGAAAGGTTGCCGAATCACTGGGCCACTCTGTTCTTGGCTGGCGTTCTGTGCCCACTGATAATACAGGATTGGGCAAATCGGCCCTGCAGACCGAACCAGTGATTGAACAAGTGTTTCTTACGCCAAGCACCAAATCAAAACTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTTTCAGATGCTGCTATAACATCAGCTTTAGACCTCCATAGTGATGGCATTGCTGATTTTTATACATGTTCACTTTCATCAAGGACTGTTGTTTATAAAGGTCAGTTAACACCAGCTCAGTTGAAGGGTTACTACTTTGCAGACCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCACGATTCTCAACTAATACTTTTCCTAGTTGGGATCGTGCTCAACCAATGCGAGTTTTGGGCCACAATGGAGAAATCAACACACTTAGAGGCAATGTTAACTGGATGAAGGCACGTGAGGGCCTACTAAAGTGCAAGGAGCTTGGTCTATCCGAGAACGAGTTAAAGAAGCTTTTGCCCATTGTGAATACAACTTCATCTGATTCAGGTGCTTTTGATGGCGTGCTTGAGTTTTTGGTTCAGTCTGGAAAAAGTCTTCCTGAAGCTGTCATGATGATGATCCCTGAAGCATGGCAAAATGACAAGAACATGGATCCCCAGCGTAAAGCATTTTACGAGTATTTCTCGGCTCTCATGGAGCCATGGGATGGGCCTGCTCTTATATCATTTACTGATGGTCACTATCTTGGAGCAACATTGGATAGGAATGGTCTGCGGCCAGGCCGCTTTTATGTCACTCACAGTGGACGAGTTATAATGGCAAGTGAAGTTGGGGTTGTAGACATTCCTCCTGAAGACGTTTGTAGGAAAGGAAGACTAAATCCTGGCATGATGCTTCTAGTAGATTTTGAGAAGCATGCTGTTGTGAATGATGATGCCTTGAAGGAACAGTACTCTTTGTCACGGCCTTATGGGGAGTGGCTAAAAAATCAGAAGATTCAGCTCCAAGACATAGTTGACTCTGTTCATGAATCTGAAAGAGTGCCTCCAAGCATAGCCGGGGTGATTCCAGCATCTGGTGATGATGCAGATATGGAAAATATGGGAATTCATGGTTTACTGACTCCATTGAAAGCTTTTGGCTATACAGTTGAATCCTTGGAGATGTTATTACTTCCCATGGCAAAGGATGGTACAGAAGCCCTTGGTTCAATGGGAAATGATACTCCACTAGCTGTCATGTCTAACCGGGAGAAGCTTACTTTTGAGTACTTCAAGCAAATGTTTGCCCAAGTGACAAACCCACCTATTGATCCTATTCGTGAGAAAATAGTCACTTCCATGGAATGTATGGTTGGTCCAGAAGGTGACCTAACAGAAATTACTGAGGAACAATGCCACCGTCTTTCACTAAAAGGCCCTCTTTTATCCATTGAACAAATGGAAGCCATTAAAAAGATGAATTATAGGGGATGGCGGAGCAAAGTGATAGACATCACATACTCAAAGGATCGTGGTAAGAAAGGGTTGGACGAAGCTTTGGACAGGATATGTGCAGAAGCACATGATGCAATTAATGCTGGCTACACCACCCTTGTGCTGTCTGATAGAGCCTTCTCAAGGAAACGGGTTTCTGTTAGCTCCCTCTTGGCCGTTGGTGCTGTCCATCAACATCTAGTTCCACCAAAAGCTGGTGGGGAATTCTACTCAAAAGGTGAATTGGTCAAGAAGTACTTCAAAGCAAGCAACTATGGAATGATGAAGGTCCTTGCGAAGATGGGAATATCTACTTTGGCCTCTTACAAAGGTGCTCAGATTTTTGAAGCTCTGGGTCTTTCCTCAGAAGTAATTGAAAGGTGCTTTGCCGGAACCCCAAGCCGAGTTGAGGGGGCAACATTTGAGATGCTTGCTCGCGATGCTCTTAAATTGCATGAATTGGCATTTCCTCCTCGTGTTTTCTCTCCTGGGAGTGCTGAAGCTGTTGCTTTGCCAAATCCTGGCGATTACCACTGGAGAAAAGGTGGTGAAATTCACTTGAATGATCCACTTGCTATAGCAAAGCTTCAAGAGGCTGCCAGAACTAACAGTGTAGATGCATATAAACAGTACTCCAAGATCATTCATGAGTTAAATAAGGCTTGCAACTTGCGAGGAATACTGAAATTTAAAGAGGCAGCAGTGAAGATTTCACTTGATGAAGTTGAACCTGCTAGTGAGATAGTTAAACGATTTTGCACTGGGGCCATGAGTTATGGGTCAATCTCATTGGAGGCGCACACAACATTGGCAACTGCTATGAATAAGATTGGAGGGAAATCCAACACAGGTGAGGGTGGTGAGCAACCATCACGCATGGAGCCTCTTCCTGATGGCTCAATGAACCCAAAAAGAAGTGCTATCAAGCAGGTTGCTAGTGGGAGATTTGGTGTTTCAAGTTACTATCTTACAAATGCTGATGAATTGCAGATAAAGATGGCCCAGGGAGCTAAACCAGGAGAGGGAGGTGAACTTCCTGGCCACAAGGTTGTAGGAGACATTGCTGTCACCAGGAATTCAACTCCTGGGGTAGGACTTATCAGCCCCCCACCTCATCACGATATTTATTCCATTGAAGATCTTGCCCAATTAATTCATGATCTAAAGAATGCCAACCCGGCTGCTCGAATTAGTGTCAAGTTGGTATCAGAAGCTGGAGTAGGCATAATTGCTAGTGGAGTTGTTAAAGGGCATGCTGACCATGTCTTGATCTCCGGCCATGATGGAGGGACAGGGGCATCCAGGTGGACTGGAATAAAGAATGCTGGGCTCCCTTGGGAACTTGGCTTGGCCGAGACCCACCAAACTTTGGTAGCTAATGACCTCCGTGGTCGCACAACTCTCCAAACTGATGGGCAACTCAAAACAGGAAGAGATGTGGCCATAGCTGCTCTCCTTGGTGCAGAAGAGTTTGGTTTCAGTACAGCTCCACTCATTACTCTCGGTTGCATTATGATGCGGAAGTGCCACAAGAATACCTGTCCTGTTGGCATTGCTACCCAAGATCCAGTACTCAGAGAAAAGTTTGCTGGAGAACCTGAGCATGTCATCAACTTCTTCTTCATGGTTGCTGAAGAGATGAGAGAAATTATGGCCCAGCTTGGGTTTAGGACTGTCAATGAGATGGTTGGCCGTTCAGACATGCTTGAAGTTGATAAAGAAGTCACTAAGACCAGTGAGAAATTGCAGAACATTGATCTCTCTCTATTGCTTAGACCTGCAGCTGAACTGCGGCCAGAAGCTGCTCAATACTGTGTGCAAAAACAAGATCATGGTTTGGACATGGCTTTGGATAATAAGCTCATTGGTTTGTCCCATGCTGCTTTGGAGAAGGGTCTCCCAGTATACATTGAAAGTCCAATTTATAATGTGAACCGTGCTGTGGGAACTATGCTTAGCCATGAGGTGACCAAAAGGTACCTCTTAGATGGTCTTCCTAATGACACCATTCATATCAGATTTACAGGAAGCGCAGGCCAGAGCTTTGGTGCATTCCTTTGTCCTGGTATCACTCTGGAACTTGAAGGCGATAGCAATGATTATGTTGGTAAAGGGTTGTCTGGCGGCAAGATTGTAGTATATCCTCCAAAGAAGAGTACCTTTGACCCAAAGACTAATATTGTAATTGGTAATGTGGCACTCTATGGAGCTACACGTGGTGAGGCATATTTCAATGGGATGGCCGCAGAAAGATTTTGTGTGCGTAATTCTGGGGCTAAGGCGGTAGTTGAAGGCGTTGGAGATCATGGATGCGAGTATATGACTGGTGGGATAGTAGTTGTCCTTGGAAACACTGGCCGAAATTTTGCGGCAGGAATGAGTGGTGGAATTGCTTACGTTCTTGATATGGATGGAAAATTCCAATCTCGATGCAACCAGGAACTTGTAGATTTGGACAAGGTTGAGGAGGAGGAGGATATTATTACTCTTAGAATGTTGATACAACAACATCAGCGTCACACAGATAGCGTGCTTGCCAAAGAAGTGCTTTCTGACTTTGAAAATCTTCTTCCAAAATTTATCAAGGTGTTCCCCAGGGAGTACAAACGTGTTTTGGCTGGTATGAAGTCAAAGGAAGCCTCCAAAAACGCATCTTCGCCTGCTGCAATTGCAGAAGAGGGGCCAGATGAAGCAGAACTGAATGAGAAAGATGCTTTTGAAGAGCTTAAGAAAATGGCTGCTGCATCTTCAAATGGGAAGCCAAGTCAGAAGGTTGAACAGGCTGAATCATCCAAGAGACCCAGTAGAGTCACTGATGCAGTTAAACATAGAGGTTTTGTTGCTTATGAGCGTGAAGGTGTTCAGTATAGGGATCCTAATGTTCGGATGAACGATTGGAAGGAAGTGATGGAGGAGTCGAAGCCTGGCCCACTTCTGAAAACCCAGTCAGCCCGTTGCATGGACTGTGGTACTCCTTTCTGTCATCAGGAAAATTCTGGATGTCCTCTTGGAAATAAAATACCAGAGTTTAATGAGTTAGTATACCAAAATAGGTGGCGAGAGGCATTGGAAAGGCTTCTCGAGACAAATAACTTCCCCGAGTTCACTGGTCGGGTGTGCCCAGCACCCTGTGAAGGTTCTTGTGTCCTTGGCATTATTGAGAATCCAGTGTCTATTAAAAGCATTGAATGTGCTATCATAGACAAGGGATTTGAGGAGGGTTGGATGGTGCCACGGCCTCCCCCCAAAAGAACTGGGAGAAGAGTTGCCATTGTTGGAAGCGGACCAGCTGGGTTGGCAGCTGCTGATCAACTGAATAAAATGGGACACACAGTAACTGTGTATGAGAGAGCTGACAGGATTGGAGGGCTTATGATGTATGGGGTTCCCAACATGAAAACAGACAAAGTGGATATAGTTCAACGACGGGTCAACCTTATGGCAGAGGAGGGAGTCAATTTTATGGTGAATGCTAATGTTGGACATGATCCTATGTACGCTCTTGGTCGGCTTCAAGAAGAAAATGATGCTATTGTGTTAGCTGTCGGAGCTACGAAACCAAGGGATCTTCCTGTTCCTGGGCGGGAGTTGTCAGGAGTTCATTTTGCCATGGAGTTTCTTCATGCAAACACTAAAAGCTTGCTCGATAGCAATCTTCAAGATGGTAACTACATTTCTGCAAAGGGAAAAAAAGTTGTGGTCATTGGTGGGGGTGATACGGGCACAGATTGCATAGGGACATCCATTCGTCATGGGTGTAGTAGCATAGTAAACCTTGAACTTCTCCCACAGCCTCCCGAAACTAGGGCACCAGGCAACCCTTGGCCACAGTGGCCTCGCGTATTCCGTATAGATTACGGGCACCAAGAAGCTGCAGCTAAATTTGGCAAAGATCCAAGATCTTATGAGGTATTGACTAAGCGGTTTGTGGGAGATGAGAATGGAGTTTTGAAGGGACTTGAAGTCATACGAGTCCGCTGGGAAAAGGATGAGACAGGGAAGTTTCAGTTTAAGGAAATTGAGGGCAGTGAGGAAATCATCGAGGCTGATCTAGTGTTACTTGCCATGGGATTCCTTGGCCCTGAATCTACAATTGCAGAGAAATTGGGTATGGAGCGAGACAACAGGTCAAACTTCAAGGCAGATTATGGTCGCTTCTCAACCAGTGTGAAAGGTGTCTTTGCAGCCGGCGATTGTCGCCGTGGCCAGTCCCTCGTGGTATGGGCAATTTCGGAGGGACGCCAAGCTGCTTCACAAGTTGATAGGTACCTCACGAAAGAAGACACAGAGTACAACATTGCTCATACCAAGAGGCAGCAGCAAGACCTCACCAAGAGACAGCAGGGCGGTAGCAAGTACACAGTGATGACTTAA 6447 0.4647 MSSSSLSFAAAPAWSACTLPSNIASSRTQLNVRTVAKAKPMSFFGTRLRSSCRSLGSERLHVWRSQGPGRSPELRVVVRSALSAVPEKPMGLYDPAMDKDSCGVGFVAELSGEGNRKTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHQFYTEVVDFELPPPGKYAVGMFFLPTSDSRREESKNVFRKVAESLGHSVLGWRSVPTDNTGLGKSALQTEPVIEQVFLTPSTKSKLDLERQMYILRKLSDAAITSALDLHSDGIADFYTCSLSSRTVVYKGQLTPAQLKGYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKELGLSENELKKLLPIVNTTSSDSGAFDGVLEFLVQSGKSLPEAVMMMIPEAWQNDKNMDPQRKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFEKHAVVNDDALKEQYSLSRPYGEWLKNQKIQLQDIVDSVHESERVPPSIAGVIPASGDDADMENMGIHGLLTPLKAFGYTVESLEMLLLPMAKDGTEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMVGPEGDLTEITEEQCHRLSLKGPLLSIEQMEAIKKMNYRGWRSKVIDITYSKDRGKKGLDEALDRICAEAHDAINAGYTTLVLSDRAFSRKRVSVSSLLAVGAVHQHLVPPKAGGEFYSKGELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIERCFAGTPSRVEGATFEMLARDALKLHELAFPPRVFSPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARTNSVDAYKQYSKIIHELNKACNLRGILKFKEAAVKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLATAMNKIGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVVGDIAVTRNSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTTLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVGRSDMLEVDKEVTKTSEKLQNIDLSLLLRPAAELRPEAAQYCVQKQDHGLDMALDNKLIGLSHAALEKGLPVYIESPIYNVNRAVGTMLSHEVTKRYLLDGLPNDTIHIRFTGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPKKSTFDPKTNIVIGNVALYGATRGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGIVVVLGNTGRNFAAGMSGGIAYVLDMDGKFQSRCNQELVDLDKVEEEEDIITLRMLIQQHQRHTDSVLAKEVLSDFENLLPKFIKVFPREYKRVLAGMKSKEASKNASSPAAIAEEGPDEAELNEKDAFEELKKMAAASSNGKPSQKVEQAESSKRPSRVTDAVKHRGFVAYEREGVQYRDPNVRMNDWKEVMEESKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKGFEEGWMVPRPPPKRTGRRVAIVGSGPAGLAAADQLNKMGHTVTVYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAEEGVNFMVNANVGHDPMYALGRLQEENDAIVLAVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIVNLELLPQPPETRAPGNPWPQWPRVFRIDYGHQEAAAKFGKDPRSYEVLTKRFVGDENGVLKGLEVIRVRWEKDETGKFQFKEIEGSEEIIEADLVLLAMGFLGPESTIAEKLGMERDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAASQVDRYLTKEDTEYNIAHTKRQQQDLTKRQQGGSKYTVMT 2148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02812 2148 Gene3D - 1778 1886 - -
Aip07g02812 2148 Pfam GXGXG motif 1332 1517 IPR002489 GO:0016491
Aip07g02812 2148 Pfam Glutamine amidotransferases class-II 102 526 IPR017932 -
Aip07g02812 2148 Pfam Pyridine nucleotide-disulphide oxidoreductase 1779 2104 IPR023753 GO:0016491
Aip07g02812 2148 Gene3D Aldolase class I 556 764 IPR013785 -
Aip07g02812 2148 SUPERFAMILY FAD/NAD(P)-binding domain 1775 2115 IPR036188 -
Aip07g02812 2148 Gene3D - 1613 1777 IPR009051 GO:0051536
Aip07g02812 2148 Gene3D Aldolase class I 870 1265 IPR013785 -
Aip07g02812 2148 MobiDBLite consensus disorder prediction 2134 2148 - -
Aip07g02812 2148 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 80 759 - -
Aip07g02812 2148 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 768 2120 - -
Aip07g02812 2148 MobiDBLite consensus disorder prediction 2128 2148 - -
Aip07g02812 2148 Gene3D - 1289 1562 IPR036485 GO:0016491
Aip07g02812 2148 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1633 2118 IPR006005 GO:0006537|GO:0016639
Aip07g02812 2148 CDD gltB_C 1308 1557 IPR002489 GO:0016491
Aip07g02812 2148 Gene3D Aldolase class I 771 869 IPR013785 -
Aip07g02812 2148 CDD GltS 102 521 - -
Aip07g02812 2148 SUPERFAMILY FMN-linked oxidoreductases 571 1282 - -
Aip07g02812 2148 MobiDBLite consensus disorder prediction 1568 1591 - -
Aip07g02812 2148 CDD GltS_FMN 881 1260 IPR002932 GO:0006537|GO:0015930|GO:0016638
Aip07g02812 2148 Gene3D - 1887 2048 IPR036188 -
Aip07g02812 2148 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1654 1765 IPR028261 -
Aip07g02812 2148 Pfam Glutamate synthase central domain 771 812 IPR006982 GO:0006807|GO:0015930
Aip07g02812 2148 Pfam Glutamate synthase central domain 576 760 IPR006982 GO:0006807|GO:0015930
Aip07g02812 2148 MobiDBLite consensus disorder prediction 1603 1628 - -
Aip07g02812 2148 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 102 503 IPR017932 -
Aip07g02812 2148 Pfam Conserved region in glutamate synthase 879 1248 IPR002932 GO:0006537|GO:0015930|GO:0016638
Aip07g02812 2148 PRINTS Adrenodoxin reductase family signature 1779 1801 - -
Aip07g02812 2148 PRINTS Adrenodoxin reductase family signature 1802 1815 - -
Aip07g02812 2148 PRINTS Adrenodoxin reductase family signature 1845 1855 - -
Aip07g02812 2148 PRINTS Adrenodoxin reductase family signature 1923 1937 - -
Aip07g02812 2148 PIRSF GOGAT 760 2140 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Aip07g02812 2148 PIRSF GOGAT 28 765 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Aip07g02812 2148 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1299 1563 IPR036485 GO:0016491
Aip07g02812 2148 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 102 528 IPR029055 -
Aip07g02812 2148 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 768 2120 - -
Aip07g02812 2148 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 80 759 - -
Aip07g02812 2148 SUPERFAMILY alpha-helical ferredoxin 1631 1788 - -
Aip07g02812 2148 MobiDBLite consensus disorder prediction 967 992 - -
Aip07g02812 2148 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 102 538 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02812 Aip-Chr7 113830255 113841584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02812 K00264 - gmx:100815931 3805.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02812 07 113830255 113841584 Aip07g02812 07 113830255 113841584 ECH