Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02772 ATGGAGTCTCTCCAACTCACTCCTATTCATCACCATTCCTTTGTTCTTGTAAGGCACTCGCATCTCCAACTAGGTTCCCATTTCCCTTCTTCTCTGCTTACAAGAGCTTCAAGAAATGCTAACCTGCGCCTCACAAGATCCTTTTCCGGCGAGGTTGGTCCTCCTGCTTCCCATAACGAAGACAACCCCTTTCCCTTAAAAGACGAGCAACCACAAGAACAAGAAAGGGGTCTCTTGTTGGCCAGAGAGACAGATGATTTTGGCTCACTTGTTGGCTTCCGTTTGATTCCTGGCTCCGGGATCACGACAGAAGAACAACCTGAGGCTAAGGTTGGAGAAGAGTTAGAAGAGAAAGCTGAGGCTAAGGTTGGAGAAGAGTTAGAAGAGAAAGCTGAGACTAAGGTGTCCTATAATATTACCTTTGTTACTGCTGAAGCTGCTCCATATTCAAAGACTGGTGGCCTTGGAGATGTTTGTGGTTCTTTGCCAATAGCACTGGCATCTCGTGGCCACCGTGTTATGGTCGTCTCGCCAAGATATATGCATGGTACTTCTGAGGATGCTAGGTATTCTGGTGCAGTTGACATGGATTGCAACATCCAAATATATTGCTTTGGTGCTGCTCAAGAAGTTGGCTTTTACCATGAGTATAGGAAAGGTGTTGATTGGGTATTTGTGGATCACCCTTCATTTCATAGAGCAGGGAGTCCATATGGGGACATGTATGGCACTTTTGGGGACAATCAGTTTCGGTACACTTTGCTTTGCCATGCTGCATGTGAAGCCCCATTGGTGCTTCCATTGGGAGGGTACACTTATGGAGAAAGATGTTTATTCCTAGTTAATGATTGGCATGCCAGCCTTGTTCCAGTACTTTTGGCAGCAAAGTATCGTCCACATGGGGTATATAAGGATGCACGCAGTGTATTAGTTATACATAACATTGCACACCAGGGAGTGGAACCTATAGTTACATATGGTAACTTGGGGCTACCTTTGGAGTGGCGTGGAGCACTGGAGTGGGTGTTCCCCAATTGGGCAAGGATGCACGCTCTCGACACTGGTGAAGCTGTCAATTTTTTGAAAGGTGCCATTGTTACAGCAGATCGGATAGTTACAGTAAGCAAGGGTTATTCCTGGGAAATCACAACCAGTGAAGGTGGATATGGTCTACATGAGCTACTGAAAGATCGAAAAAGTGTTCTCAGTGGGATCACAAATGGAATTGATGTTACTGAATGGGACCCTTCATCTGATCAATATATTCCTTTCAAATATTCTGCTGATGACCTCTCTGGGAAGGTCAAATGCAAGATAGAATTGCAGAAGGAATTGGGTCTTCCAGAGAGACCCGATTGCCCAGTGATTGGATTCATTGGAAGGCTAGACTATCAAAAAGGAATTGAGCTGATTCGCATGGGAATTGCAGAACTCATGGAAGATGATGTTCAGTTTGTAATGCTTGGGTCTGGAAATCCTGCATACGAAGATTGGATGAGAGCAACAGAGGCTACTTATAGAGATAAATTTCGGGGTTGGGTTGGATTTAATGTTCCAATATCTCATAGAATAACTGCAGGGTGTGATATACTATTGATGCCATCGACATTCGAGCCTTGCGGACTAAATCAGTTGTATGCAATGAGATATGGAACTATACCAGTGGTTCATCAAACCGGGGGGCTGAGAGATACTGTTCAAAATTTTAACCCATTTGCTGAAGTAAAAAATGATGAAGGCACAGGGTGGACGTTTTCTCCACTAACAAAGGAGAACATGTTAGTGGCTCTGAGATATGCCATACAAACATACAGAGAATACAAGTCTTCTTGGGAGGGATTGATGAGAAGAGGAATGACAAGAGACTATACTTGGGTAAATGCTGCTACTCAGTATGAACAAGTCATAGAATGGGCATTTATGGATCCACCCTATTGCTGA 1941 0.4415 MESLQLTPIHHHSFVLVRHSHLQLGSHFPSSLLTRASRNANLRLTRSFSGEVGPPASHNEDNPFPLKDEQPQEQERGLLLARETDDFGSLVGFRLIPGSGITTEEQPEAKVGEELEEKAEAKVGEELEEKAETKVSYNITFVTAEAAPYSKTGGLGDVCGSLPIALASRGHRVMVVSPRYMHGTSEDARYSGAVDMDCNIQIYCFGAAQEVGFYHEYRKGVDWVFVDHPSFHRAGSPYGDMYGTFGDNQFRYTLLCHAACEAPLVLPLGGYTYGERCLFLVNDWHASLVPVLLAAKYRPHGVYKDARSVLVIHNIAHQGVEPIVTYGNLGLPLEWRGALEWVFPNWARMHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTSEGGYGLHELLKDRKSVLSGITNGIDVTEWDPSSDQYIPFKYSADDLSGKVKCKIELQKELGLPERPDCPVIGFIGRLDYQKGIELIRMGIAELMEDDVQFVMLGSGNPAYEDWMRATEATYRDKFRGWVGFNVPISHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHQTGGLRDTVQNFNPFAEVKNDEGTGWTFSPLTKENMLVALRYAIQTYREYKSSWEGLMRRGMTRDYTWVNAATQYEQVIEWAFMDPPYC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02772 646 Pfam Glycosyl transferases group 1 451 602 IPR001296 GO:0016757
Aip07g02772 646 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 66 646 - -
Aip07g02772 646 Gene3D Glycogen Phosphorylase B; 157 635 - -
Aip07g02772 646 Gene3D Glycogen Phosphorylase B; 411 622 - -
Aip07g02772 646 MobiDBLite consensus disorder prediction 47 72 - -
Aip07g02772 646 CDD GT5_Glycogen_synthase_DULL1-like 138 638 - -
Aip07g02772 646 Hamap Glycogen synthase [glgA]. 137 639 IPR011835 GO:0004373
Aip07g02772 646 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 138 636 IPR011835 GO:0004373
Aip07g02772 646 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 136 640 - -
Aip07g02772 646 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 66 646 - -
Aip07g02772 646 Pfam Starch synthase catalytic domain 138 396 IPR013534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02772 Aip-Chr7 112753765 112759520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02772 138 636 Glycosyltransferase AT3G01180 51.383 1.56e-167 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02772 K00703 - gmx:100807354 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02772 07 112753765 112759520 Aip07g02772 07 112753765 112759520 ECH