Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02762 ATGCCAACACCAGCTTTCACTTTCTACTCTACAATGTCAGCTTCAGCTTCGTTTCTTGCTCCGTCCCCCTCTTTCGCTCCATTCAGGGGTAGCAAAGAGGTTCCACGTATGTTTTCAGTGTCTGACCTGAAAAGCATAGCATGCAACAAAAAGGAGAATCGCACTTCAAAGCTTTACATTATACCCATCACCACTGTTACTCGCTTTTGTGCCTCAAGAGCTTCACTTGAGTCCTTGCACTTTGCTGACACTAATGCTAATCAAAATCACAGTACCTTGACTCTGCAACTTGTGTTCCGCAGAATAAACGAATTTGAGACAGAGTTGAACGAGTTCTTTGATGAAGTGAAAACAATGATTAGAATGGGAAAAAGAGATGATGCTCTTGACCTACTTAATGCAAATTATGAAGTGGTCAAAGATCGGATGAATGCCGGCTCTAAAGGCATTCAAGAAGCTGCAATTCTGGATGTCTTAGCGCTGGGTTATGTGGCTGTTGGAGACCTAAAAACTGTTGCTTTTTTGTTGAATGTGATGAGAAAAGTGATTGACAATTTGAAAGATGACACACCACATCTAGATTTGATACTTATGCATATGGGAAGTATGTATTCAACATTGAGCAAGTTTGGAAAATCACTGGACACATATCAAAGGGCTTTCAACATTATGGAAAGGACCTATGGTAAGGACAGCCCTTTTCTTGTCACACCCTATTTGGCTATGGCAAAGGTTCTTGGTTCAACTGGAAAAGCAACAAAAGCCATAGAGAAATACCAGTCTGCAATAACTATTTTGGAGTCTAAGAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTGGTCTTGGCAATCTTTTACTGAAAGAAAGAAGAGTCAACGACGCAGAAACTCATTTTACTAGGGTTCTCGACATATACACAAAGTCATATGGACAAAATGATGGAAGAATTGGATTGGCCATGAGTTCCCTAGCCCAAGTTAAGTGTGCTCAAGGGAAGTCAGATGAAGCAATCAATTTGTATGAACATGCACTTCATGTCATGAAAGATTCCAATTACTTGTCGGCAGATGACAGCATCATGGAAAAGATGAGGGTAGATCTTGCTGAGTTGCTTCATGCTGTCGGGAGAGCACAAGAAGGCAGAGAATTATTAGAGGAATGCTTATTAATCACAGAGAGGCACAAAGGAAAAGGTCACCCCGGCTTAGTGACACACATGATAAATCTTGCAACTTCATATTCCCGATCGAAGAATTATGCAGAGGCCGAGCACTTGTTGAGAAGAAGTTTGGAAATAATGATAAAGCAGAAAGGAAGCGATGACCAGTCCGTCAGCTTTCCAATGTTGCAACTTGCAGTTACGCTTTACCACTTGAAACAAGATGAAGAAGCTGAGAAACTGGCACTGGATGCTTTGCGCATCCGTGAGAAGGCATTTGGAGAAGATTCTCTTCCAGTTGGGGAGGCTTTGGACTGTTTGGTGTCTATTCAAACTCGAGTTGGTAAAGATGAGAGCGAGTTAGTTGTGCTACTTAGAAGGATTCTAGGTATACAAGAGAAAGAATTTGGATACGAGAGTGAGGAAGTTTTGGTTACAGTGAAAAAGATTGTATTCTTGTTGGATAAACTAGGGAGAAGAGATGAAATGCTTCCCTTGCAGAGGAGGTTGTCTCTGCTTAGAAAGAAGTATAAGCAGATGATTCATCACTGA 1719 0.4124 MPTPAFTFYSTMSASASFLAPSPSFAPFRGSKEVPRMFSVSDLKSIACNKKENRTSKLYIIPITTVTRFCASRASLESLHFADTNANQNHSTLTLQLVFRRINEFETELNEFFDEVKTMIRMGKRDDALDLLNANYEVVKDRMNAGSKGIQEAAILDVLALGYVAVGDLKTVAFLLNVMRKVIDNLKDDTPHLDLILMHMGSMYSTLSKFGKSLDTYQRAFNIMERTYGKDSPFLVTPYLAMAKVLGSTGKATKAIEKYQSAITILESKRGAESKDLVVPLLGLGNLLLKERRVNDAETHFTRVLDIYTKSYGQNDGRIGLAMSSLAQVKCAQGKSDEAINLYEHALHVMKDSNYLSADDSIMEKMRVDLAELLHAVGRAQEGRELLEECLLITERHKGKGHPGLVTHMINLATSYSRSKNYAEAEHLLRRSLEIMIKQKGSDDQSVSFPMLQLAVTLYHLKQDEEAEKLALDALRIREKAFGEDSLPVGEALDCLVSIQTRVGKDESELVVLLRRILGIQEKEFGYESEEVLVTVKKIVFLLDKLGRRDEMLPLQRRLSLLRKKYKQMIHH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02762 572 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 103 557 - -
Aip07g02762 572 SMART tpr_5 236 269 IPR019734 GO:0005515
Aip07g02762 572 SMART tpr_5 406 439 IPR019734 GO:0005515
Aip07g02762 572 SMART tpr_5 448 481 IPR019734 GO:0005515
Aip07g02762 572 SMART tpr_5 278 311 IPR019734 GO:0005515
Aip07g02762 572 SMART tpr_5 194 227 IPR019734 GO:0005515
Aip07g02762 572 SMART tpr_5 320 353 IPR019734 GO:0005515
Aip07g02762 572 Pfam Tetratricopeptide repeat 452 486 - -
Aip07g02762 572 Gene3D Tetratricopeptide repeat domain 160 365 IPR011990 GO:0005515
Aip07g02762 572 Gene3D Tetratricopeptide repeat domain 366 572 IPR011990 GO:0005515
Aip07g02762 572 SUPERFAMILY TPR-like 254 475 IPR011990 GO:0005515
Aip07g02762 572 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 103 557 - -
Aip07g02762 572 Pfam Tetratricopeptide repeat 282 349 - -
Aip07g02762 572 Pfam Tetratricopeptide repeat 196 268 - -
Aip07g02762 572 Pfam Tetratricopeptide repeat 365 436 - -
Aip07g02762 572 SUPERFAMILY TPR-like 120 265 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02762 Aip-Chr7 112683047 112686216 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02762 - - aprc:113852595 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02762 07 112683047 112686216 Aip07g02762 07 112683047 112686216 ECH