Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02738 ATGTTTGATAATTTATCAGTTGGAGGGAGTAGGTCCTCTGTGGGACTTATGGATTTTATGTGGTGGAGTGACCATATCCTTGCTGTTGTAGAAAGGAATGGTGTTGTTTCATTGATTGACATCCTAAATGGTTCAAAAGTTCAGGAAGAGGGTCCTGCATACTTTTTGCCTGTTGTAGAAGGTGCACCAAAATACAAGGGATGTCTTTTTCTGTTAGCAACTCCGTCATCTCAAGAAAGATCTAATCCTTCTGATGTTGGATCAACAGATGAGTTACAACATATAGAGTGGATCACTGAAGATAGGCTTAATCAGTTTCACTTTTCTAGGTTGCTCTGGTGCCTTGTTACTTTTTCTGAGAAATCTGTCCCTGAAATGTACAGTATATTGATTAGCAAGAAAAGATATCATGATGCTCTGGATTTCGCTGATAGTCATGGACTGGATAAAGATGAAGTTCTGAAGTCACAATGGTTGAATTCTAGTCAAGGATTAAATGAAATAAATAAATATTTGTCAAGTATTAAGGATAGAGAGTTTGTACTTTCCGAATGTGTTGATAGAATTGGACCTACAGAAGATGCTGTGAAAGCTTTACTGGATTATGGTCTCCACATCACTGACCATTATAGATTCTCAGAAGTAGATGATCATACTTCTACTCTAGTATGGAATGCTCGTTTGGCCAGACTTCGAATTTTGCAATTTAGAGATAGGTTAGAAACATTTCTCGGAGTAAACATGGGAAGGTTTTCTGTGCAGGAATATGGCAAGTTTCGTGTTATGCCTATTAGCGAAGCTGCTGTAGCACTGGCTGAAAGCGGAAAAATTGGTGCCTTAAATTTGCTGTTTAAGCGTCATCCATATTCTTTATCTCCATTTATGTTGGAAATTTTATCTGCCATCCCAGAAACAGTTCCTGCCGAAACATATGTGCAGCTTCTTCCTGGGAGATCTCCTCCTGCTGGTGTTGCAGTGAGGAAAGATGATTGGGTTGAATGTGAGAAGATGGTTTGTTTCATTAACACATCAGTTGAAAGCCATGACATTCAAATCCAAGTCAAAACTGAACCACTTGTTAAACATTTTCTTGGAACTTTTTGGCCATCCATTGATGAGCTCACCAATTGGTATAAAACAAGAGCTAGATTCATGGATGATTTCAGTGGGCAGCTGGATAATTGTTTAAGCTTTCTTGAGTTTGCTCTTCACAAAGGTTTATCTGAGTTGCAGCAATTCCATCAGGATGTCCTATACTTGTATCAAATTATTTATTCTGATGACAGTGATGGCGAAACAAGCTCCAATATGAGTCTTGCCAAGTGGGGAGAGTTGTCGGACTATGATAAATTTAAATTTATGCTTAAGGGAGTCAAAGAGGAGAATGTAAATGAAAGACTACGCAATAGAGCTATTCCTTTTATGCATGGAAAGCTTCACATGGTATCTCTAAGCGGAGATATTAGTCTTCTTGATTCTGCAAATCAAAATATAGAGAAATCATTTCTGGTGAGATGGTTGACAGAAACTGCTTTGGTGAATAAATTGAACATATGCTTGGTGGTTATTGAGGAAGGGTGCAGAAACTTCCAAAGTACTACAATTCAAATAGAGAACCTTGAGAGAAGACTTAGACTTGCTGAAGGTCATATTGAAGCTGGGAGACTCTTGGCATTCTACCAGGTCCCAAAGCCATTAAACTTTTTTGTGGAGGCTGAATCAGATGAGAAGGGTGTCAAACAGATCATTCGCCTTATTCTATCTAAATTTATTCGCCGTCAACCTAGCCGATCTGATAGTGAATGGGCCACTATGTGGCGTGATATGCAATACTTGAGGGAAAAAGCATTTCCTTTCCTGGACCTGGAGTATATTTTGGTTGAATTTTGCAGAGGGCTGCTCAAAGCTGGGAAGTTCTCTCTTGCAAGAAATTACTTGAAGGGTACGAGTTCAGTTTCTTTGGCATCGGAGAAGGCAGAAAGCCTTGTCATTCAAGCAGCTAGGGATTACTTTTTCTCAGCTTCAAGTCTTTCTTGTTCAGAAATCTGGAATGCTAGAGAATGCCTTAACCTATATCCAAATAGTGCAAATGTCAAGGCAGAGGCAGATATTATTGATGCACTTACAGTTAAGCTTCCCAACCTTGGGGTGAACATTCTGCCCATGCAGTTCAGGCAAATAAAGGATCCTATGGAGATTGTGAAAATGGCAATCACAAGTCCAACTGGAGCATATTTTCATGTTGATGAACTTATTGAAGTTGCTAGACTTCTTGGCCTGAGGTCTGCAGATGAAATAGCAGCTGTTGAGGAAGCTATTGCTAGAGAAGCTGCAGTTTCAGGTGATTTGCAATTGGCATTTGATCTTTGTCTTGTTTTGGCCCGCAAGGGGCATGGTTACGTATGGGATTTATGTGCTGCAATTGCAAGAGGTCCTGCTCTTGAAAATATGGATGTAGACTCTAGAAAGCAACTTTTAGGCTTTGCTTTGAGCTACTGTGATGAGGAATCCATTGGGGAGCTTCTCCATGCATGGAAAGACTTGGATTTGCAAGGCCAGTGTGAAACATTAATGATTTCGACAGGGACAAATTCTTCAAGATTTTCATTACAGGGTTCGTCTTTTAACTCACTTCCCAAACAAAGCATTCAAAATATTTGCTTTCAAGCGTCTAATGACATGAATACCAACAATCAGGATGTTCATCTTGAGAAAATTAAAGAAGAGCTTTCTGCTGTTGCTAAAAGCTTAGCTATTGGTGATCAAGCAGATTGGGCATCGTCCTTGACTGAAAATGTAAAAGTTCTGTCTTTTGCTGCTTCACAACTCCCTTGGTTGCTTGACTTGAGTAAGAAAGGAGAACATGATACAAAATTCATAACTGGGAAGCAGTATTTGAACATCAGAACACAGGCTGTGGTGATCATTTTGTCCTGGTTGGCTAGAAATGAATTTTCCCCTAGAGACAATCTGATTGCTTCTCTAGCAAAATCAGTTATGGAGCAACCAGTTACTGAAGAAGAAGATATAATTGGGTGTTCTTATCTTTTGAATCTTTTTGATGCTTTCAATGGAGTGGAAATTATAGAAGAACAGCTCAAAATACGAAAAGATTACCAGCAAGTTTGTAGCATCATGAATGTTGGGATGGCTTACAGCTTATTACACAATTCTGGAATAGGGACTGATCCTATTCAGAGGAAGGAGCTATTGAAGATGAGGTTTAAGGAAAAGCATGCATCACCCACTTCTGATGAAATAGATAAGCTTGGCAAGGTACAGTCCTCATTTTGGAGAGAGTGGAAACTGAAACTAGAAGAGCAAAAGCGTCTGACTGATCATTCCAGAGCACTACAAAAGATAATTCCTGGGGTTGAAACAGAGCGTTTTCTGTCTGGGGATTCCATTTATATTGAGAATGTAGTTCTTAATCTCATTGAGTCAGTAAAAATGGAGAAAAAGCACATTCTGAAGGACATTTTAAAATTGGCTGATACTTATGGCTTAAAGAGTACTGAGGTGCTATTGCAATACTTAAGTGCTGTCCTTGTTTCTGATGTTTGGACAAATGATGATATTACAGCTGAAATTGCAGATTGTAAAGGAAAAGTAGTTGACAATGGAGCCAATACCATTGAAACCATTTCATCAATTGTATACCCAGCAATTGATGGGTGCAACAAACTCCGGCTTGCTTATGTGTATGGCCTGTTGGCAGAGTGCTACTTGCAGCTGGAAAGCACCAAAGATTCATCACCAATGGCATATCATGATCATCAAAATTCTGATTTAAGGTTTGCTCATTATTACAGAGTCATTGAGCAAGAGTGCAAACGTGTATCATTTGTTAACAATCTTAACTTCAAAAATATAGCTGGTTTACATGGTTTGAATTTTGAGTGTTTTAGTGAGGAAGTTTATGCATGTATAGACGACAGTAGCTTGTCAGCTTTGTCAAAAATGGTACAGACTCTTGCAAATATTTACGGCGATTCATTGCCCGAGGGATTCATGTCATGGCAGGATGTCTACAAGCATTACATCCTGCATTTGCTCAGTGATTTGGAGAGCAAAGCTGCAAATGAATCTAGTGGCAGAACGCCTGAGTACCTTCAAAGCTTCATAAGTAAGCTTGAGCACAGCTATGGTTCATGCCGATCATACATTAGACTTTTGAGTCAGTCTGATGCTTTGGGGATCATGAAGAAGTACTTCACTATAATCATTCCTCTTTACAGTTCTTATGGATTCATACCAGACAATTCAACATGGCAAGACTGTCTTATTGTTCTTCTAGACTTCTGGATGAGACTGGCAGATGATATGAAAGAAGTTGCATTGGAGGAAAGCTCAGGAGAAACTGTTTGCTTCAATCCAGTGTGTTTAATAAGTTGTCTGAAAGCTTTTATGAAATTGGTGATGGAGGATATAATCTCACCAAGTCAGGGATGGGGAAGTATTTATGGCTATGTCCAGTGTGGTTTGAGTGGCGAGTCTACTTTAGAAATTTATAATTTCTGCAAAGCTATGATTTTTTCTGGCTGTGGGTATGGGGCCGTTGCTGAGGTTTTTTCTGTTGCATCGTCAGAATCAGGTTTAGCTTCTGATTCTGGCCAAGGTTCCCAAGATCTTCCTCATTTCTATTTGGATATTCTGGAAGCTGTTCTGCAGGAATTAGTCAATGGATCCCATGAGAACCGGAACCTGTTTCATATATTGTCATCTTTAAGCAAGTTTGAAAGTGATGTAAAAGTCATGCAATGTGTTAGACGTGTAATTTGGGAAAGAATGGTACAGTTCTCCGACAATTTACAGTTGCCAAGCTCCATCAGAGTTTATGTGTTAGAGCTTATGCAATATATATCAGGTAAAAGTATAAAGGGTTTCTCAGCTGAAATGGAAGCCAATGTCCAACCGTGGGAAGAATGGAATGAGTTGCTTTTTGCTGGCAGCAAGAGTGAGACTGATGTCAACAAGCAGTTGCTGGATAACAAAGATTCTTCTAATAGGTTTACAAATACTCTGGTTGCTCTAAAATCATCTCAGCTTGTAGCATCGATCTCTCCTAGCATAGAAATCACCGCAGACGACCTATTGAATGTAGACTCGGCTGTTTCTTGCTTTCTGAAGTTCTTTGGAGAAGCGAGTAATGATTCCCACTTTGATGCTCTGATAGCTATTTTGGAAGAGTGGGATGGACTGTTCACAACAGTGAAAGATCGACAAAGAGAAAATGCTGCTGAAGCATCTGAAGGTGGGAATGACTGGAACAATGATGATTGGGACGAGGGATGGGAAAGTCTTGAGGAAGTGGAAAACACCGAGAAAGTAAAGAAAGGGGACTCTGCTTCTGTTCATCCGTTACATGTGTGTTGGACAGAAATATTTAAAAAGCTCATAAGCGTATCAAGGTTTAGTGATGTGCTGAGACTGATTGATCAATCATTATCAAAACCGAATGTTACGTTACTTGATGAAGATGATGGCAGGAGCTTAAGCCAGATAGCACTCGGCATCGATTGCTTTGCGGCTTTGAAGATGACATTGTTGCTGCCTTACAAAGCATTACACTTACAGTGTCTGGTTGCAATTGAGGATAACTTGCGTCAAAGCATCCCTGCTTTAATGATTAGGAATGTTGAGTTACTAATTCTCGTTCTCTCATCTGGGCTTCTCACTACTATCTCCAGCGACTCCACCTATGGTAAAAGTTTCTCTTATATCTGCTATTTGATTGGAAACTTATCCAATCAATGTCAACAAGCTTTGGTATCAGGTAAAAGAATCAACACTAGTGAAGACGCTGAGAATCCATTGCTGCTTTTCAGAACGACCCTTTTCCCTATGTTCATATCAGAACTTGTGAAAGCTGATCAGCATGTTCTAGCTGGATTTCTTGTCACAAAATTCATGCACACTAATGAGTCGCTGAGTCTCATTAACATTGCAGAGGCCAGTCTCGATAGGTATCTGGAAAGGCAGTTGCACTTGCTACAGGTCAATGAGATCCCTGTTGACAAGACATGTATAACACTGAAGAACACTGTTGGAAGCTTGAGAGGCAAGATGAGCAGTTTAATCCAGTCCACATTGCCATTGCTTCCTACTAGAGTTAGATGA 6120 0.3974 MFDNLSVGGSRSSVGLMDFMWWSDHILAVVERNGVVSLIDILNGSKVQEEGPAYFLPVVEGAPKYKGCLFLLATPSSQERSNPSDVGSTDELQHIEWITEDRLNQFHFSRLLWCLVTFSEKSVPEMYSILISKKRYHDALDFADSHGLDKDEVLKSQWLNSSQGLNEINKYLSSIKDREFVLSECVDRIGPTEDAVKALLDYGLHITDHYRFSEVDDHTSTLVWNARLARLRILQFRDRLETFLGVNMGRFSVQEYGKFRVMPISEAAVALAESGKIGALNLLFKRHPYSLSPFMLEILSAIPETVPAETYVQLLPGRSPPAGVAVRKDDWVECEKMVCFINTSVESHDIQIQVKTEPLVKHFLGTFWPSIDELTNWYKTRARFMDDFSGQLDNCLSFLEFALHKGLSELQQFHQDVLYLYQIIYSDDSDGETSSNMSLAKWGELSDYDKFKFMLKGVKEENVNERLRNRAIPFMHGKLHMVSLSGDISLLDSANQNIEKSFLVRWLTETALVNKLNICLVVIEEGCRNFQSTTIQIENLERRLRLAEGHIEAGRLLAFYQVPKPLNFFVEAESDEKGVKQIIRLILSKFIRRQPSRSDSEWATMWRDMQYLREKAFPFLDLEYILVEFCRGLLKAGKFSLARNYLKGTSSVSLASEKAESLVIQAARDYFFSASSLSCSEIWNARECLNLYPNSANVKAEADIIDALTVKLPNLGVNILPMQFRQIKDPMEIVKMAITSPTGAYFHVDELIEVARLLGLRSADEIAAVEEAIAREAAVSGDLQLAFDLCLVLARKGHGYVWDLCAAIARGPALENMDVDSRKQLLGFALSYCDEESIGELLHAWKDLDLQGQCETLMISTGTNSSRFSLQGSSFNSLPKQSIQNICFQASNDMNTNNQDVHLEKIKEELSAVAKSLAIGDQADWASSLTENVKVLSFAASQLPWLLDLSKKGEHDTKFITGKQYLNIRTQAVVIILSWLARNEFSPRDNLIASLAKSVMEQPVTEEEDIIGCSYLLNLFDAFNGVEIIEEQLKIRKDYQQVCSIMNVGMAYSLLHNSGIGTDPIQRKELLKMRFKEKHASPTSDEIDKLGKVQSSFWREWKLKLEEQKRLTDHSRALQKIIPGVETERFLSGDSIYIENVVLNLIESVKMEKKHILKDILKLADTYGLKSTEVLLQYLSAVLVSDVWTNDDITAEIADCKGKVVDNGANTIETISSIVYPAIDGCNKLRLAYVYGLLAECYLQLESTKDSSPMAYHDHQNSDLRFAHYYRVIEQECKRVSFVNNLNFKNIAGLHGLNFECFSEEVYACIDDSSLSALSKMVQTLANIYGDSLPEGFMSWQDVYKHYILHLLSDLESKAANESSGRTPEYLQSFISKLEHSYGSCRSYIRLLSQSDALGIMKKYFTIIIPLYSSYGFIPDNSTWQDCLIVLLDFWMRLADDMKEVALEESSGETVCFNPVCLISCLKAFMKLVMEDIISPSQGWGSIYGYVQCGLSGESTLEIYNFCKAMIFSGCGYGAVAEVFSVASSESGLASDSGQGSQDLPHFYLDILEAVLQELVNGSHENRNLFHILSSLSKFESDVKVMQCVRRVIWERMVQFSDNLQLPSSIRVYVLELMQYISGKSIKGFSAEMEANVQPWEEWNELLFAGSKSETDVNKQLLDNKDSSNRFTNTLVALKSSQLVASISPSIEITADDLLNVDSAVSCFLKFFGEASNDSHFDALIAILEEWDGLFTTVKDRQRENAAEASEGGNDWNNDDWDEGWESLEEVENTEKVKKGDSASVHPLHVCWTEIFKKLISVSRFSDVLRLIDQSLSKPNVTLLDEDDGRSLSQIALGIDCFAALKMTLLLPYKALHLQCLVAIEDNLRQSIPALMIRNVELLILVLSSGLLTTISSDSTYGKSFSYICYLIGNLSNQCQQALVSGKRINTSEDAENPLLLFRTTLFPMFISELVKADQHVLAGFLVTKFMHTNESLSLINIAEASLDRYLERQLHLLQVNEIPVDKTCITLKNTVGSLRGKMSSLIQSTLPLLPTRVR 2039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02738 2039 Pfam Secretory pathway protein Sec39 268 480 IPR013244 GO:0006890
Aip07g02738 2039 Pfam Secretory pathway protein Sec39 541 849 IPR013244 GO:0006890
Aip07g02738 2039 PANTHER NEUROBLASTOMA-AMPLIFIED SEQUENCE 9 1991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02738 Aip-Chr7 112244143 112254086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02738 K20473 - gmx:100805223 3188.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02738 07 112244143 112254086 Aip07g02738 07 112244143 112254086 ECH