Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02736 ATGATTCCGGAAGAAGTTAAACTTGATTTGATGCTCTTTGATCCTATCAAGCAGGCAGGAGATAAAACAGcggccttttggtggatttggagggataggaacaatgacatcttCCACCAAGATGATCCATGGAGTAAGGAGAAAATTGTTCACTTAGTTAAACATGCTGCTCGAGATTTCTCTAATGTTGTTATCAACCAAAAACATATTATTCCTTCTTCTTTGAAATATAACTGGGAACCACCTCCAATGAATGTCTGTAAAGTGAACTGCGATGCAAGCGTTTTTGAAAATGAGCAATTAGCTGGCTTTGGGTGTATTATTAGAGACAGCATGGGAATTTGGATAAAAGGTTGTTCTGCCAGTATACCTCTTTCTAGTGTTCTCTGTTGGGAGCTTCAtgctatttggagagggcttgttatggcttgggattgcgagtgcaaagaggtcatatgtgaaactgataatcttgaTGCGTTTCTTCTTGTTTCGCGAGGCACAACCAGCATGATTAGGAATGACTCTGATCTGCTTGACAAAATCAACGAGATGCTCCAGCGCAATTGGACAACTACTTTAGTGCTCATCCAGCGAACAGCAAACAGGGCGGCTGATTTAATGGCTAAGACTGCTGTTTTAAACAAGCAGGTAGAGAGAGAGAGAGAGATGGAGACTTTACCTCCCGAAATCTGTCTCAAGGTATTCTGTTTCCTGGATCACCACCATCTTGCTCTTGCTCAATTAGTGTGCAGGAAGTGGAAGTTCATCGCCTCCGACAACGATCTATGGTCTAATCTTTTTAAGGAAAGATGGGGAGGAAATCATGCTGCTTTCTATGCTCCAATCGGTTCAAAATCTTGGAAGGATGTATATGAGGTTCAAGACCGCTGCGATCGAGTTGGAGTGGGTTTGAAGATTATTAGAGAAGGTAGCGACTACTATCTTGTTCACCAAGGTGAGATCCAGCGACATCTGGGTTCAAGAAAGAATCAAGAACATGTTAATGGACGCAGCAGCCACACTTTTTGTTCAGAAAATGACTTCATTGGAGAAGGTTCTCTGATTCAAGAGAGATCTCGCCGCGGAATTCTGGACAAGATCCTATTCTTCATTGGGGATTTGGAAGTTGCTTCTGCTGGTGCAAAACGCAGGCGTCCACTCTGA 1167 0.3847 MIPEEVKLDLMLFDPIKQAGDKTAAFWWIWRDRNNDIFHQDDPWSKEKIVHLVKHAARDFSNVVINQKHIIPSSLKYNWEPPPMNVCKVNCDASVFENEQLAGFGCIIRDSMGIWIKGCSASIPLSSVLCWELHAIWRGLVMAWDCECKEVICETDNLDAFLLVSRGTTSMIRNDSDLLDKINEMLQRNWTTTLVLIQRTANRAADLMAKTAVLNKQVEREREMETLPPEICLKVFCFLDHHHLALAQLVCRKWKFIASDNDLWSNLFKERWGGNHAAFYAPIGSKSWKDVYEVQDRCDRVGVGLKIIREGSDYYLVHQGEIQRHLGSRKNQEHVNGRSSHTFCSENDFIGEGSLIQERSRRGILDKILFFIGDLEVASAGAKRRRPL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02736 388 SUPERFAMILY F-box domain 223 296 IPR036047 GO:0005515
Aip07g02736 388 ProSiteProfiles F-box domain profile. 221 267 IPR001810 GO:0005515
Aip07g02736 388 CDD RNase_H_like 89 210 IPR044730 -
Aip07g02736 388 SMART fbox_2 227 267 IPR001810 GO:0005515
Aip07g02736 388 ProSiteProfiles cAMP/cGMP binding motif profile. 151 227 IPR000595 -
Aip07g02736 388 Gene3D - 212 301 - -
Aip07g02736 388 SUPERFAMILY Ribonuclease H-like 86 215 IPR012337 -
Aip07g02736 388 Pfam Reverse transcriptase-like 90 212 IPR002156 GO:0003676|GO:0004523
Aip07g02736 388 PANTHER F-BOX ONLY PROTEIN 48-RELATED 209 386 IPR045118 GO:0019005|GO:0031146
Aip07g02736 388 Pfam F-box-like 225 268 IPR001810 GO:0005515
Aip07g02736 388 Gene3D - 86 211 IPR036397 GO:0003676
Aip07g02736 388 PANTHER OS02G0686500 PROTEIN 209 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02736 Aip-Chr7 112221740 112224833 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02736 - - adu:110281634 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02736 07 112221740 112224833 Aip07g02736 07 112221740 112224833 ECH