Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02724 ATGAATCCTCTTAGACGAAGTAACAATTCGAATTCTTCGTCTTCGAATTCCTCCCCTTCTTCATCATCGTCGTCGTCATCGTCTTCATCGTGGATCCATTTGCGTTCGGTTCTATTCGTTGTCACTTCTTCCTCACCAGCGTCTTGTTCCACCTCTGATCGAGGTCGTCTTAAATCACCATGGTCACGTAGGAGAAGAAAACATGCCCTTTCACCTCAGCAGTGGAAGAGCTTGTTTACACTGGACGGAAAACTCCGTGATGGTGGAATTAAGTTCCTGAAAAGAGTTCGCAGTGGAGGTGTTGATACTAGTATCAGGGCTGAAGTTTGGCCATTCCTACTTGGAGTTTATGACTTGGACAGTACCAAAGAAGAGAGAGATATCATAAGAACTCGAAATAGAAAGGAATATGAGAAACTCCGCAGGCGATGCCGCCAACTTCTAAAGCAATGCAATGAGAGCTTTAAGTTAAACGAAATTGGTGAAATAAGCTATGAAGGAGATGGTGAGAGTCTTATTCAAGCTTCTGGTTCTCCTAGTTCTGAAGATGCAACGAGTGCTAGGCAATCCCTTTCCAGTGAGGAAAGGAGCCCAGATGTTGAATATTCAGATGATCCGTCTAGTGCCCTGTTGGAAGGGAATGATGTCAACAACGTTGATGCAGCATCGGATACTGATTCTACTGATTCAGATTCCTCTGATGGTCCTGAGGTAATTCAGACTTCTCCTTCTAATGAATTTCAGGAGGATAACACTTCCAAGACAGCTTCTACAGAAATTTCTTCATCCCAAATGAATGGCCCATCAAGACTACCAAACAATGAAGATTTTGCCACTTGGCAACGGATCATCCGACTAGATGCAGTACGTGCCAATGCAGAATGGATACCATTTTCACCTTGTCAAGCTGTTATACCAGAGAGCAGGGCAATCCGATCTGCTGAGGCTGTTGGATTGAAGGAATATGGGCACTTAGAACCCAATAGAATTTTCCATGCTGCCCGATTGGTTGCTATTCTTGAAGCATATGCATTATATGATCCAGAAATCGGCTACTGCCAGGGTATGAGCGATCTGCTGTCTCCAATAGTTAGTGTTATATCAGAAGATCACGAGGCCTTCTGGTGCTTTGTTGGATTCATGAAGAAGGCACGCCAGAACTTTAGGCTTGATGAGGTGGGTATCAGGAGGCAACTTGATATAGTAGCAAAGATAATCAAGTTCAAGGATTCTCACTTGTTCAGACATCTGGAGAAGCTTCAGGCCGATGATTGCTTTTTTGTGTACAGGATGGTGGTTGTGTTGTTTAGAAGGGAATTGACATTTGAACAGACTCTCTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGGGCCGGCATTGGGAAATCAGCATGGAGCAGAATCAGGCAGCGTGCTCCACCAACAGATGATTTATTGCTGTATGCAATAGCGGCTTCAGTGTTGCAGAGGAGGAAATTGATTATTGAGAAGTATAGCAGCATGGATGAGATCATCAAGGAATGCAATGGTATGGCTGGACACCTTGATATTTGGAAGCTGCTGGATGATGCGCACAATTTGGTCGTCACTCTTCATGATAAAATGAAACTAGAGACATCATTTCGATGA 1638 0.4402 MNPLRRSNNSNSSSSNSSPSSSSSSSSSSSWIHLRSVLFVVTSSSPASCSTSDRGRLKSPWSRRRRKHALSPQQWKSLFTLDGKLRDGGIKFLKRVRSGGVDTSIRAEVWPFLLGVYDLDSTKEERDIIRTRNRKEYEKLRRRCRQLLKQCNESFKLNEIGEISYEGDGESLIQASGSPSSEDATSARQSLSSEERSPDVEYSDDPSSALLEGNDVNNVDAASDTDSTDSDSSDGPEVIQTSPSNEFQEDNTSKTASTEISSSQMNGPSRLPNNEDFATWQRIIRLDAVRANAEWIPFSPCQAVIPESRAIRSAEAVGLKEYGHLEPNRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDSHLFRHLEKLQADDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLQRRKLIIEKYSSMDEIIKECNGMAGHLDIWKLLDDAHNLVVTLHDKMKLETSFR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02724 545 MobiDBLite consensus disorder prediction 1 30 - -
Aip07g02724 545 Pfam Rab-GTPase-TBC domain 335 455 IPR000195 -
Aip07g02724 545 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 9 537 - -
Aip07g02724 545 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 393 531 IPR035969 -
Aip07g02724 545 Coils Coil 130 150 - -
Aip07g02724 545 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE 9 537 - -
Aip07g02724 545 MobiDBLite consensus disorder prediction 170 274 - -
Aip07g02724 545 ProSiteProfiles TBC/rab GAP domain profile. 100 456 IPR000195 -
Aip07g02724 545 SMART tbc_4 97 482 IPR000195 -
Aip07g02724 545 MobiDBLite consensus disorder prediction 45 65 - -
Aip07g02724 545 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 256 388 - -
Aip07g02724 545 MobiDBLite consensus disorder prediction 171 193 - -
Aip07g02724 545 MobiDBLite consensus disorder prediction 210 274 - -
Aip07g02724 545 Gene3D - 392 539 - -
Aip07g02724 545 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 74 416 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02724 Aip-Chr7 112036490 112041236 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02724 - - gmx:100793557 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02724 07 112036490 112041236 Aip07g02724 07 112036490 112041236 ECH