Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02712 ATGGACTTCCGACAACACTACCAACCACACAAACCCCAATCTTTCATAAATTTGCACACGATCGATTCTGATGCTCAGATGTCGCAACCCAACTCCTACTTTAACCCCGCCGATTTGCTCCACAGTCCTCCCTTAATTGTTGCTGGGCTTGCTCCGGCTGATGGCGGTGCCGATTTGCAATGGAGTTACGGTTTGGAGAAGGAGGGAAAAAGGTTAAAGGAACATGATTTTTTGGAGAACAATTCTCAGGGTGAACAAATGCGGCAATCCATTCTACGGAAAGTTCAGGAAACGCAACTTCAGAGTCTATCTATCATTGAAAACGAAGTCCTTCGTAAACTCCATGAGAAAGAATCTGAGGTAGAAACCATCAATAAGAAGAACGTAGAACTTGAAGAGAGAATGGAGCAGTTAAGTGCTGAAGCCGATGTCTGGCAACAACGAGCCAGATATAATGAGAATATGATTTCTGCTTTGAAATTTAAGCTTCAGCAAGTTTATGTCCATAGCAGAGACAGTAAGGAAGGATGTGGTGACAGTGAGGTAGATGATACAGCTTCATGCTTCAACGGCCATTCCATTGATTTTCAACTTCTCTCCCAAGAGAAGAACAATATGAAAGAAATGATGACTTGCAAGGCTTGCAGAGTCAATGAAGTCACCATGCTTTTATTACCTTGTAGGCATCTCTGCCTCTGTAAAAATTGCGAGAGTAAGCTCAGTTTTTGTCCTGTGTGTCAATCCTCTAAATTCATTGGCATGGAGGTGTTTATGTAA 777 0.4247 MDFRQHYQPHKPQSFINLHTIDSDAQMSQPNSYFNPADLLHSPPLIVAGLAPADGGADLQWSYGLEKEGKRLKEHDFLENNSQGEQMRQSILRKVQETQLQSLSIIENEVLRKLHEKESEVETINKKNVELEERMEQLSAEADVWQQRARYNENMISALKFKLQQVYVHSRDSKEGCGDSEVDDTASCFNGHSIDFQLLSQEKNNMKEMMTCKACRVNEVTMLLLPCRHLCLCKNCESKLSFCPVCQSSKFIGMEVFM 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02712 258 Coils Coil 114 148 - -
Aip07g02712 258 ProSiteProfiles Zinc finger RING-type profile. 212 247 IPR001841 -
Aip07g02712 258 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 83 258 IPR017066 -
Aip07g02712 258 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 5 83 IPR017066 -
Aip07g02712 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 258 IPR013083 -
Aip07g02712 258 PANTHER F2G19.2 83 258 - -
Aip07g02712 258 PANTHER F2G19.2 5 83 - -
Aip07g02712 258 Pfam Zinc finger, C3HC4 type (RING finger) 210 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02712 Aip-Chr7 111704207 111705899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02712 212 248 Miscellaneous Gene Families AT2G21380 48.649 9.70e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02712 K19042 - qsu:112029423 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02712 07 111704207 111705899 Aip07g02712 07 111704207 111705899 ECH