Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02536 ATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCATACACTTTCCAACAGAGGTGCAGGTGAAAGTTTACATAGAAATGTTGTATGTTCGCCTTCGTGGAGCTTTCGATGGGATAGTTGGGGCCATGTTGCTGGTGAAATTGAGGATCCTTCCTTTCACACGTCACGCAGAGTCAGCAGAAATATCAGCATGGAGCTCAAAGGGTCACTAAGTTCTGAAAGAGGCAATTTATCTGATGGGGGAAGCACCCTGGAGAATTCTGTAACACCTATTTCTCAGAAGTCCCCTGTGCATGAGCGACTGGTCGCAAATCAGATGACCCCATCTTCAAATCTTTCCTTGTCAAGCAATTGCTCTACAGTGGTGAAAAATTTGGCAGAATCACCGGAAATTGCAGAATCTTCAATGCCAAATGTTTCGTATTCAATACCTTCAGTTTTCTCAACACCTACAACCGATCCATTGCCTAATCATAATGATCACAATCTACCTAATTCAATGCCATCGAGATGGGCTCATAGATCTCCAGGACACCCCCTTTTGAGACAAATATCTGACAGCCGAATTCTGGGTCTGAAGTCACCGGACAACTCTATTTCTGAGGGAAGACCGTCATTTGTACTCTCCACTTGCAGTAATGACATGGCAACTGGATCCCAATGTGGGTCATCTGATGGCTGGTCTATGCGAACCTTTTCTGAGCTGGTCGCTTCGTCTCAAAAGGAACGGTGGTCTTTTGATAGCGAGTATTTTGGTTCAGGACGTCTTAAGATAAGTGGAGCTAGTAGTAGGTTCTCGTATTCACCCTCAATGGATTTACAATCTTGTGGGGCATGCTCGAGGCTCTTGACCGAGAGATCTGCATGGGGTAACCAGAAATTTTTTACCAGCAGTGATGTCTCGGTTGTTGCCGTTCTTGTCTGTGGTCATGTATATCATGCAGACTGCTTGGAAACTATGACACCGGAGACAGATAGTTATGATCCAGCCTGTCCAATTTGTATGGTCGGAGAGAAGCACTTGTCGAAGTTATCACGAAAATCAGAGATGAAGGCCAAGAACCACAAGATATCCCGAAACCGGGTTGTTGACAGCTATCTTGATGGTGGGTTAGATGTATTTGATCGCCAAAAAGGGGTTGAATGGGGTGGGAAATCTTCAAAGATGGAAGCCAGCTCCAGTACAAGGAGTAACTCAGTTGGAAAACCATTCTTAAGGCGGCATTTTTCACTCGGATCCAAGTGGAGCCGATCCCTGTCGGAGAATGATTCTGCGAGGAAGAAGGGTTTCTGGGCACGGCATCGTAAAGATTGA 1314 0.4559 MGSACCVAAKDHTLSNRGAGESLHRNVVCSPSWSFRWDSWGHVAGEIEDPSFHTSRRVSRNISMELKGSLSSERGNLSDGGSTLENSVTPISQKSPVHERLVANQMTPSSNLSLSSNCSTVVKNLAESPEIAESSMPNVSYSIPSVFSTPTTDPLPNHNDHNLPNSMPSRWAHRSPGHPLLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDMATGSQCGSSDGWSMRTFSELVASSQKERWSFDSEYFGSGRLKISGASSRFSYSPSMDLQSCGACSRLLTERSAWGNQKFFTSSDVSVVAVLVCGHVYHADCLETMTPETDSYDPACPICMVGEKHLSKLSRKSEMKAKNHKISRNRVVDSYLDGGLDVFDRQKGVEWGGKSSKMEASSSTRSNSVGKPFLRRHFSLGSKWSRSLSENDSARKKGFWARHRKD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02536 437 MobiDBLite consensus disorder prediction 416 437 - -
Aip07g02536 437 ProSiteProfiles Zinc finger RING-type profile. 276 334 IPR001841 -
Aip07g02536 437 MobiDBLite consensus disorder prediction 69 89 - -
Aip07g02536 437 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 431 - -
Aip07g02536 437 PANTHER EXPRESSED PROTEIN 1 431 - -
Aip07g02536 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 337 IPR013083 -
Aip07g02536 437 SUPERFAMILY RING/U-box 275 335 - -
Aip07g02536 437 SMART ring_2 276 334 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02536 Aip-Chr7 105359481 105362831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02536 - - gmx:100793040 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02536 07 105359481 105362831 Aip07g02536 07 105359481 105362831 ECH