Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02512 atgaaaATCTTTTGTTTGGGCTTAGGCCAGTTTCAGTTCCCCAAGGCCCAAAAAGAGCATTGTAGTAGCAGTCTAGCAGAAAAGAGGAAAGCAGCTGCACTGGGCCTTGTTGCAAGCGGAAGGAAAATGATGTTGAGTCGGCGGGTGGCCGCAGCACTGCCGTTCCGGTTCGCCGCTCCTGCCGCGAACCAAGTTCCCATGCCAAAGCACCACCTTCCTCTTATATCCTTCCATCCCGAAAACGTTGCCGTTTTATGCTCCAGATCCAACTCCAGCTTAAGTCAACAATCGGAAACGGAGCATGTTGACTACTCACTGTTTCGGACGCAGCAGACTAACCTCAAACCAGGCCTTTATCTCGTTGGAACACCAATTGGAAATCTCGAAGATATCACCTTTAGGGCTCTTCGCGTGCTGAACTCTGCAAATGTGATTCTCTCGGAAGATACGAGGCACTCTGGCAAGTTGCTTCATCACTACAACATCAAAACTCCCCTCATGAGTTATCACAAGTTCAACGAGTCGCAAAGGGAGCAACTTGTGTTGAAGAGGCTCAAAGAAGGCGAGATTGTGGCCCTCATATCTGATGCTGGAACTCCAGGCATCAGTGATCCTGGCATGGAATTGGCCAAATTATGTATTAGTGAAAATATCCTTGTTGTTCCAATCCCTGGTCCCTGTGCTTTGGTATCAGCTCTTTCTGCTTCGGGTTTGCCTACTCACGAGTTCACATTTGTTGGTTTTCTTCCAAAGCATTCAGGATCAAGAAGGAAGAGGCTTATGTCTTTGGCAGATCAAACAGCTACACAGATATTTTATGTTCCTCCTCACAAGCTTTCCCAATTTCTTGAAGAGGCTTCTTCTATATTTGGTGATGCAAGGCAATGTGTCATTGCTCGGGAAATGACCAAGTTACATGAAGAGTTTTGGCGTGGTACGGTAAGAGAGGCCAAGGAAGTCTTTTTGATGCGGCAGCCGAAGGGAGAACTAACCATATTGATTGAAGGGCAAACAAGTTCTAAAGTGGAACCTCCATCAGACAGTGAGCTTGAAGATGAACTAAGAGAATTGATTGCAAGTGGCGAGACTCTATCCACGGCTGTGAAATTGGTTGCTGGCAGAACATCAGCGAGTAAAAAGACTATATATTCACTTGCATTAAAAACATTTGGAAAGCAGCTTCAAGGGGAAGACGATTCAAACTAG 1206 0.4594 MKIFCLGLGQFQFPKAQKEHCSSSLAEKRKAAALGLVASGRKMMLSRRVAAALPFRFAAPAANQVPMPKHHLPLISFHPENVAVLCSRSNSSLSQQSETEHVDYSLFRTQQTNLKPGLYLVGTPIGNLEDITFRALRVLNSANVILSEDTRHSGKLLHHYNIKTPLMSYHKFNESQREQLVLKRLKEGEIVALISDAGTPGISDPGMELAKLCISENILVVPIPGPCALVSALSASGLPTHEFTFVGFLPKHSGSRRKRLMSLADQTATQIFYVPPHKLSQFLEEASSIFGDARQCVIAREMTKLHEEFWRGTVREAKEVFLMRQPKGELTILIEGQTSSKVEPPSDSELEDELRELIASGETLSTAVKLVAGRTSASKKTIYSLALKTFGKQLQGEDDSN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02512 401 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 118 317 IPR000878 GO:0008168
Aip07g02512 401 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I 108 398 IPR008189 GO:0008168
Aip07g02512 401 Gene3D - 103 224 IPR014777 GO:0008168
Aip07g02512 401 Gene3D - 225 342 IPR014776 GO:0008168
Aip07g02512 401 ProSitePatterns RsmI AdoMet-dependent methyltransferase protein family signature. 195 206 IPR018063 GO:0008168
Aip07g02512 401 SUPERFAMILY Tetrapyrrole methylase 116 334 IPR035996 GO:0008168
Aip07g02512 401 CDD RsmI 119 335 IPR008189 GO:0008168
Aip07g02512 401 Hamap Ribosomal RNA small subunit methyltransferase I [rsmI]. 117 336 IPR008189 GO:0008168
Aip07g02512 401 TIGRFAM TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 118 387 IPR008189 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02512 K07056 - gmx:100819709 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02512 07 104934122 104937828 Aip07g02512 07 104934122 104937828 ECH