Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02496 ATGCCTATGGTCCTTTTGCCCCTATTTTTTCGTGAAACCATGGCTTCGCACATCTTCTCCCTTCTTCTTATGTTCTTCTTCGTCACTCTCGTCTCTGCTTCTTCCTCCGACACTTCCCAACTATTCCGGAGCTGGTGTGACCACCACGGCAAGATATACTCCTCCGACGAAGAGAGAAGCTACCGCCTCAAAGTCTTCCAGGACAACTATGACTATGTCCAGCGTCACAACCAGATGGCTAATTCCCCTTATACCCTCTCCCTCAACGCCTTCGCCGATCTTACCCACCAAGAATTCAAGGCCTCTCATCTTGGCGCTCTTTCCTCTTCCTTCCTCAGATTCAAGAATCATCAAGATCACCAGTCCCGCTATCACAATGACAATGACAATGACAATAATATCCTCCGTCAGGTTCCTTCTTCAATTGATTGGAGAAATGAAGGGGCGGTTACTCCCGTCAAAAACCAAGGAAGCTGCGGGGCTTGTTGGGCGTTCTCTGCAACAGGAGCTATTGAAGGTATAAATAAGATTGTGACAGGGACCCTTGAAAGCCTTTCTGAACAAGAACTGGTTGATTGTGATAAAAAATACAACAGCGGCTGTGAAGGTGGTCTCATGGACTATGCTTATCAATTTGTGATTGATAACCACGGAATCGACACTGAGAGCGATTATCCATTCCTTGCTCATGATGCCGCTTGCAACAAGAACAAGATGAAGAGGCGTGTTGTTACAATTGATGGTTATACTGATGTGCTCCCAAGTAATGAGAAGAAGCTCCTAGAGGCTGTTGCAACTCAGCCTGTAAGTGTAGGCATATGTGGCAGTGCTAGGGCTTTTCAGTTATACTCTCAGGGTATCTTCACCGGACCATGTTCAACTGCTTTGGATCATGCAGTGTTGATTGTAGGGTATGGTTCAGAGAACGGAGTAGATTATTGGATTGTTAAGAACTCGTGGGGAACATCATGGGGAATGAATGGTTACATACACATGGTGCGAAACAACGGTTCTCAAGGGATATGCGGCATCAACATGCTAGCTTCGTATCCAACCAAGACGACGCCTAATCCTCCTCCTCCGCCACCACCAGGTCCTACAAAATGTAATCTGTTTACTTACTGTCCAGCAGCGGAAACCTGTTGCTGCTCGTGGCGTGTTCTTGGGTTGTGCTTATCATACAAATGCTGTGGGTTAGACTCTGCTGTGTGCTGTAAGGACAATAGCCATTGTTGCCCTCAGGATTATCCTATTTGTGATATAAGAAACGCTCAATGTCTTAAGAGAGTTTCGAATGGGACAACAACGATGGCATATGAGAACAAAGACTCTATCCGTAGGTCAAGAGGTTGGAGCTCTGGTTAA 1365 0.4615 MPMVLLPLFFRETMASHIFSLLLMFFFVTLVSASSSDTSQLFRSWCDHHGKIYSSDEERSYRLKVFQDNYDYVQRHNQMANSPYTLSLNAFADLTHQEFKASHLGALSSSFLRFKNHQDHQSRYHNDNDNDNNILRQVPSSIDWRNEGAVTPVKNQGSCGACWAFSATGAIEGINKIVTGTLESLSEQELVDCDKKYNSGCEGGLMDYAYQFVIDNHGIDTESDYPFLAHDAACNKNKMKRRVVTIDGYTDVLPSNEKKLLEAVATQPVSVGICGSARAFQLYSQGIFTGPCSTALDHAVLIVGYGSENGVDYWIVKNSWGTSWGMNGYIHMVRNNGSQGICGINMLASYPTKTTPNPPPPPPPGPTKCNLFTYCPAAETCCCSWRVLGLCLSYKCCGLDSAVCCKDNSHCCPQDYPICDIRNAQCLKRVSNGTTTMAYENKDSIRRSRGWSSG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02496 454 PRINTS Papain cysteine protease (C1) family signature 156 171 IPR000668 GO:0006508|GO:0008234
Aip07g02496 454 PRINTS Papain cysteine protease (C1) family signature 298 308 IPR000668 GO:0006508|GO:0008234
Aip07g02496 454 PRINTS Papain cysteine protease (C1) family signature 313 319 IPR000668 GO:0006508|GO:0008234
Aip07g02496 454 PANTHER OS05G0508300 PROTEIN 26 386 - -
Aip07g02496 454 Gene3D Cysteine proteinases 27 354 - -
Aip07g02496 454 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 156 167 IPR000169 -
Aip07g02496 454 Pfam Papain family cysteine protease 138 351 IPR000668 GO:0006508|GO:0008234
Aip07g02496 454 Pfam Granulin 380 427 IPR000118 -
Aip07g02496 454 SMART GRAN_2 369 426 IPR000118 -
Aip07g02496 454 SMART Inhibitor_I29_2 42 99 IPR013201 -
Aip07g02496 454 Pfam Cathepsin propeptide inhibitor domain (I29) 42 99 IPR013201 -
Aip07g02496 454 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 296 306 IPR025660 -
Aip07g02496 454 CDD Peptidase_C1A 139 350 IPR039417 -
Aip07g02496 454 Gene3D Granulin 367 436 IPR037277 -
Aip07g02496 454 SMART pept_c1 138 352 IPR000668 GO:0006508|GO:0008234
Aip07g02496 454 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 313 332 IPR025661 -
Aip07g02496 454 SUPERFAMILY Cysteine proteinases 37 352 IPR038765 -
Aip07g02496 454 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 386 - -
Aip07g02496 454 SUPERFAMILY Granulin repeat 366 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02496 Aip-Chr7 104735896 104738307 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02496 - - ahf:112705594 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02496 07 104735896 104738307 Aip07g02496 07 104735896 104738307 ECH