Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02495 ATGGACCTCGATCCTCGTCAATACGAAAACATTGCTATAAATGATGATGACATCCATAGTATTATTCTGTCATATCTTATACACAATTGCTACAAAGAATCAGTGGAGTCATTCATTGCTTGCACTGGGATGAAGCAGCCAGCAAATTATATGGAGAACATGGAGAAAAGAAAAAGAATCTTTCACTTTGCACTAGAAGGAAATGCACTTAAGGCTATTGAGCTTACTGACCAGATGGCGCAGGAAATTTTACAAAATAATAAGGATTTACACTTTGATCTTCTAAGCCTTCATTTTGTGGAGCTCATATGCTCTAGAAAATGCTCAGAAGCCTTGGAGTTTGCACAGACCAAGTTGAGCCCTTTCGGAAAGGAGAAAAAATACATGGAAAAGCTTGAAGACCTCATGGCTCTTCTTGCTTACAAGGACCCAGAGAAGTCCCCAATAACACTTGAACCTTCCCAGCTACACAGCAATGGAAAGACTAATACAACAAACTACGGTGGTCAGGCAATGCTTAAATCAAGAGGCTGGCAAGGATGGCCCCACACCATTTTCTTTGAAGGATTTCCTCAAAAGTTGATGGAAAATAGTCAAATATCTAAAGGCAAATGA 615 0.3967 MDLDPRQYENIAINDDDIHSIILSYLIHNCYKESVESFIACTGMKQPANYMENMEKRKRIFHFALEGNALKAIELTDQMAQEILQNNKDLHFDLLSLHFVELICSRKCSEALEFAQTKLSPFGKEKKYMEKLEDLMALLAYKDPEKSPITLEPSQLHSNGKTNTTNYGGQAMLKSRGWQGWPHTIFFEGFPQKLMENSQISKGK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02495 204 Pfam CTLH/CRA C-terminal to LisH motif domain 54 159 IPR024964 -
Aip07g02495 204 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Aip07g02495 204 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Aip07g02495 204 PANTHER RAN BINDING PROTEIN 9-RELATED 8 150 - -
Aip07g02495 204 SMART toby_final6 106 190 IPR013144 -
Aip07g02495 204 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 150 - -
Aip07g02495 204 SMART ctlh 53 110 IPR006595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02495 K23338 - gmx:100801338 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02495 07 104563944 104565901 Aip07g02495 07 104563944 104565901 ECH