Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02469 ATGAGCAAGAAGGCGACAGCAGCACCTGATCCGGTGGCGGTGCTACGGGGCCACCGTGCTTCCGTGACGGACATTTGTTTTCATCCCTCTGATCGCATTCTCTTCTCTGGTTCTGTTGACGGTGAAGTTCGCATTTGGGATACCCTTCAGCATCGAACTCTCTCTTCTTCTTGGTATTCTATCAATCTTTACAAATCATTACTATGTACATCTCTGATTCTGATTCTGGGTTATTTTTGTATGTATTGCAGGATACACAGTGCTGCCCACGGGATTGTTGCTGTCACCACTAGTGCTTCCCTTGGAACCAATAAACTCGTTAGCCAGGGTAGGGATGGAACTGTTAAAGTTTGGGACTTTGCTCATGCTGCTTTGTCTAGGAGTCCACTGCTTACCATCAATACCAACACTTATCACTTTTGCAAGCTTTCCACTAAACCTCATTACGTCACAGAAAATATGTATGCTGACGGGCTACAGTATGTGGCTTTAGCAGGGGAGAACCCTTCTGAGGTCGAAATTTGGGATCTCAAATCAGCTGAAAGATTTGTACGACTCCCTTCAAGCAACCCTAGTAGCTCTTCAGTTTGCAACAAAGATAGAGGGATGTGCATGGCACTTCAATTGTTTTTACCATCTGAATCACAGGGATCTCTAAATGTCTTGGCCGGTTATGAGGATGGTTCCATGCTTTGGTGGGATGTACGAAATCCTGGAGTTCCAGTAACCGCTGTAAAGCTCCATTCTGAACCAGTTTTGAGCATCTGTATTGATGGGTCATGCAGTGGGGGCATCTCAGGAGCTGCAGATGACAAGATTGTAATGTATAGCTTGGACCACTCTTCGGGTATATGTGTAATCAAGAAAGAAATCAATTTGGAGCGACCTGGCATATCAGGCACTTCAATTCGTCCTGATGAAAAAATTGCTGCAACTGCCGGTTGGGACCACAGAGTAAGGATATATAATTACCGCAAAGGAAATGCTTTAGCAATACTAAAGTATCACCATGCAACGTGCAATGCTGTAACTTACTCATATGATTGTAAGCTTATGGCCTCTGCCTCCGAAGACACAACGGTGGGGCTTTGGGAATTATATCCTCCTCGAACATGA 1116 0.4489 MSKKATAAPDPVAVLRGHRASVTDICFHPSDRILFSGSVDGEVRIWDTLQHRTLSSSWYSINLYKSLLCTSLILILGYFCMYCRIHSAAHGIVAVTTSASLGTNKLVSQGRDGTVKVWDFAHAALSRSPLLTINTNTYHFCKLSTKPHYVTENMYADGLQYVALAGENPSEVEIWDLKSAERFVRLPSSNPSSSSVCNKDRGMCMALQLFLPSESQGSLNVLAGYEDGSMLWWDVRNPGVPVTAVKLHSEPVLSICIDGSCSGGISGAADDKIVMYSLDHSSGICVIKKEINLERPGISGTSIRPDEKIAATAGWDHRVRIYNYRKGNALAILKYHHATCNAVTYSYDCKLMASASEDTTVGLWELYPPRT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02469 371 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 333 371 - -
Aip07g02469 371 ProSitePatterns Trp-Asp (WD) repeats signature. 352 366 IPR019775 -
Aip07g02469 371 PANTHER TRANSDUCIN BETA-LIKE 3 156 371 - -
Aip07g02469 371 PANTHER - 156 371 - -
Aip07g02469 371 SUPERFAMILY WD40 repeat-like 10 366 IPR036322 GO:0005515
Aip07g02469 371 SMART WD40_4 326 365 IPR001680 GO:0005515
Aip07g02469 371 SMART WD40_4 76 119 IPR001680 GO:0005515
Aip07g02469 371 SMART WD40_4 284 323 IPR001680 GO:0005515
Aip07g02469 371 SMART WD40_4 8 47 IPR001680 GO:0005515
Aip07g02469 371 SMART WD40_4 238 277 IPR001680 GO:0005515
Aip07g02469 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 106 128 IPR001680 GO:0005515
Aip07g02469 371 PANTHER TRANSDUCIN BETA-LIKE 3 5 59 - -
Aip07g02469 371 PANTHER TRANSDUCIN BETA-LIKE 3 85 144 - -
Aip07g02469 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 15 56 IPR001680 GO:0005515
Aip07g02469 371 PANTHER - 5 59 - -
Aip07g02469 371 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 15 47 - -
Aip07g02469 371 PRINTS G protein beta WD-40 repeat signature 106 120 IPR020472 -
Aip07g02469 371 PRINTS G protein beta WD-40 repeat signature 34 48 IPR020472 -
Aip07g02469 371 PRINTS G protein beta WD-40 repeat signature 352 366 IPR020472 -
Aip07g02469 371 Gene3D - 209 370 IPR015943 GO:0005515
Aip07g02469 371 PANTHER - 85 144 - -
Aip07g02469 371 Gene3D - 5 206 IPR015943 GO:0005515
Aip07g02469 371 Pfam WD domain, G-beta repeat 11 47 IPR001680 GO:0005515
Aip07g02469 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 333 371 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02469 K24770 - gmx:100800482 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02469 07 103555230 103559874 Aip07g02469 07 103555230 103559874 ECH