Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02440 ATGGATCACTTGCTGTGTTGTATATCTATAGAGAACTTGCATGCCGCAGGCACCACGTTCCCTTTGATTTTTCACAGTTCACAACAAACTTCACATCAATCCACAATGGCTATGAGAAAATCAAGTAGCAGGCTTGCTTCTCAAACAACAATGATCAAGCAAATGGTGAAGAGATGCTCCAGTTTAGGAAGGAAACAACAGCAGCAAGGTGAAGACGTTCCAAAGGGTCACTTTGTTGTTTATGTTGGTGGAGTTGGAGAGAAGAGAAGCAGGTACATTCTTCCCATCTCCTTCCTCAGCACACCACAGTTTCAGATCCTCCTTCATCAGGCAGAAGAAGAGTTTGGATTTGATCATCAAATGGGTCTCACCATTCCTTGTCAACAACATGTTTTTGAGTCTCTTACTTCCATGCTCAGATGA 423 0.4279 MDHLLCCISIENLHAAGTTFPLIFHSSQQTSHQSTMAMRKSSSRLASQTTMIKQMVKRCSSLGRKQQQQGEDVPKGHFVVYVGGVGEKRSRYILPISFLSTPQFQILLHQAEEEFGFDHQMGLTIPCQQHVFESLTSMLR 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02440 140 Pfam Auxin responsive protein 53 139 IPR003676 GO:0009733
Aip07g02440 140 PANTHER SMALL AUXIN-UP RNA-RELATED 43 140 - -
Aip07g02440 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02440 Aip-Chr7 102646444 102648944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02440 31 135 Calmodulin-binding Proteins AT3G43120 37.963 1.18e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02440 K14488 - han:110918230 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00904 05 12483877 12484557 Aip07g02440 07 102646444 102648944 ECH
Aip07g02440 07 102646444 102648944 Aip05g00904 05 12483877 12484557 ECH
Aip07g02440 07 102646444 102648944 Aip07g02440 07 102646444 102648944 ECH
Aip06g00063 06 581329 581807 Aip07g02440 07 102646444 102648944 ECH
Aip03g00820 03 8022097 8023117 Aip07g02440 07 102646444 102648944 ECH