Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00904 ATGTCAAACAGAAAATCCAATAAGGTTGCACAAGCGGTAGTTCTGAAGCAGATTCTGAAGAGGTGTTCAAGTTTTGGAATGAAGCATAATAATGAAGAGGGTCTCCCTGATGATGTACCAAAAGGTCATTTTGCAGTGTATGTTGGTGAGAACAGAAGCAGGTACATTGTTCCAATATCATGGCTTGCTCATCCACGGTTTCAAATTCTTCTCCAAAGAGCTGAAGAGGAGTTTGGTTTCAACCATGACATGGGACTCACCATTCCCTGTGATGAAGTTGCTTTTGAGTCCTTAACCTCAATTATCAGATATTAA 315 0.4032 MSNRKSNKVAQAVVLKQILKRCSSFGMKHNNEEGLPDDVPKGHFAVYVGENRSRYIVPISWLAHPRFQILLQRAEEEFGFNHDMGLTIPCDEVAFESLTSIIRY 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00904 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 103 IPR003676 GO:0009733
Aip05g00904 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 103 - -
Aip05g00904 104 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00904 Aip-Chr5 12483877 12484557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00904 1 103 Calmodulin-binding Proteins AT3G43120 40.000 1.92e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00904 K14488 - gmx:100798840 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00904 05 12483877 12484557 Aip07g02440 07 102646444 102648944 ECH
Aip07g02440 07 102646444 102648944 Aip05g00904 05 12483877 12484557 ECH
Aip06g00063 06 581329 581807 Aip05g00904 05 12483877 12484557 ECH
Aip05g00904 05 12483877 12484557 Aip05g00904 05 12483877 12484557 ECH
Aip03g00820 03 8022097 8023117 Aip05g00904 05 12483877 12484557 ECH