Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02369 ATGCCTTCAATCATTGTTGGAGATGATAAACCCTATTCTTTGAGCCTCAATCCCATTCTTTCTGCGTCAGGGGTGAAGGGCAAACCAGTAGCTTCATTATGCCAAGAAAGTGATGGCATCCTTGGTTACATTCAATCAGTGATTCACGAGAAACCAGAAACTGAATCACCATTTATGGTTCTTGATTTAGGGGTGGTGATGGACCTCATGGACCACTGGTCCAGAATGCTTCCAACGGTTCAACCATTCTATGCGGTGAAATGCAACCCTAACCCATCCCTGCTTGGAACACTGGCAGCACTGGGTTCCAGTTTCGACTGCGCCAGCAAAGCAGAGATAGAAGCCGTGTTGACCCTTGGCGTCTCGTCGGATCGAATCATCTACGCTAACCCATGCAAATCAGCGTCCCACATTACTTACGCTGCAAGCGTTGGAGTCAACATCACAACCTTTGACTCTAAAGAAGAGGTAAAAAAGATTCGAAAATGGCACCCAAACTGCCAGCTTCTCCTTCGTATAAAACCGCCACAAGACAGTGGAGCGCGAAACTCCTTGGGTTTAAAATACGGTGCACTACTGGAGGAAGTTCCAGTGCTACTCCAGGCTGCACATGATGCAGGATTAACTGTCATCGGAGTTTCCTTCCACATTGGGAGCGGAGGAGCTGACGCTAAAGCATATCACGGAGCCATTGCTGCTGCGAAGGGTGTGTTAGAAACGGCTTCAAAACTAGGCATGCCAAAGATGCACGTGCTCGATATTGGTGGCGGTTTCAGTTCTGGCACAGAGTTCGATGCGGCTGCAATTCACGTGAACGATGCTCTTGAAGCCAACTTCGGAAACGAAGAGGGCATTACGGTAATTGGCGAGCCTGGCCGTTATTTTGCTGAAACGGCTTTTACGTTGGCAACAAAAGTAATCGGGAAGCGCGTGAGAGGAGAGTTGAGAGAGTACTGGATCAACGACGGGATTTATGGATGTTTGAACTGCATAATGTTTGATTTCGCGCGCGTCACGTGCACGCCACTCAGGTGCAGCTCAAAACATGACGGGGAGAATGAGTCCAAAACTTACTCTTCAACTGTGTTTGGACCAACATGTGATTCCTTAGATACAGTGCTAAGAGATCACCAGCTTATGGAGTTGGAATTGGAAGATTGGCTTGTTTTCCCTAAAATGGGGGCGTATACTATTTCTTCAGTTTGGAGGCCTTCTAACTACTGGCATTTTGGCCTTCTCCGGAACGGTTATGCAGCAAGGAAATTTGCTAAACAAGGACTTAAACCTGGGGAGCTGGCAATCATATCCAAAGAAGTGGTAGCACCTTATGAATGTCCTGCACTAAGCAAGGCTTACCTTTTTCCTGAGTCCTCCGCTAGACTTACTGGTTTCCATGTTTGTGTTGGAAGTGGATGA 1416 0.4746 MPSIIVGDDKPYSLSLNPILSASGVKGKPVASLCQESDGILGYIQSVIHEKPETESPFMVLDLGVVMDLMDHWSRMLPTVQPFYAVKCNPNPSLLGTLAALGSSFDCASKAEIEAVLTLGVSSDRIIYANPCKSASHITYAASVGVNITTFDSKEEVKKIRKWHPNCQLLLRIKPPQDSGARNSLGLKYGALLEEVPVLLQAAHDAGLTVIGVSFHIGSGGADAKAYHGAIAAAKGVLETASKLGMPKMHVLDIGGGFSSGTEFDAAAIHVNDALEANFGNEEGITVIGEPGRYFAETAFTLATKVIGKRVRGELREYWINDGIYGCLNCIMFDFARVTCTPLRCSSKHDGENESKTYSSTVFGPTCDSLDTVLRDHQLMELELEDWLVFPKMGAYTISSVWRPSNYWHFGLLRNGYAARKFAKQGLKPGELAIISKEVVAPYECPALSKAYLFPESSARLTGFHVCVGSG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02369 471 Gene3D - 413 471 IPR036188 -
Aip07g02369 471 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 84 102 IPR022653 -
Aip07g02369 471 PANTHER ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE 16 400 IPR002433 GO:0006596
Aip07g02369 471 SUPERFAMILY PLP-binding barrel 56 299 IPR029066 -
Aip07g02369 471 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 242 259 IPR022657 -
Aip07g02369 471 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 IPR000183 GO:0003824
Aip07g02369 471 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 207 220 IPR000183 GO:0003824
Aip07g02369 471 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 104 116 IPR000183 GO:0003824
Aip07g02369 471 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 102 IPR000183 GO:0003824
Aip07g02369 471 SUPERFAMILY Alanine racemase C-terminal domain-like 280 400 IPR009006 GO:0003824
Aip07g02369 471 CDD PLPDE_III_ODC 55 400 - -
Aip07g02369 471 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 52 400 IPR009006 GO:0003824
Aip07g02369 471 PANTHER DIAMINOPIMELATE DECARBOXYLASE 2 CHLOROPLASTIC 16 400 - -
Aip07g02369 471 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 67 296 IPR022644 GO:0003824
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 156 178 IPR002433 GO:0006596
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 322 335 IPR002433 GO:0006596
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 56 80 IPR002433 GO:0006596
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 361 371 IPR002433 GO:0006596
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 381 394 IPR002433 GO:0006596
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 82 109 IPR002433 GO:0006596
Aip07g02369 471 PRINTS Ornithine decarboxylase signature 126 150 IPR002433 GO:0006596
Aip07g02369 471 Gene3D Alanine racemase 66 295 IPR029066 -
Aip07g02369 471 Pfam Pyridoxal-dependent decarboxylase, C-terminal sheet domain 297 394 IPR022643 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02369 Aip-Chr7 98957993 98963544 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02369 K01581 - gmx:548088 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02369 07 98957993 98963544 Aip07g02369 07 98957993 98963544 ECH