Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02296 ATGGCAGCACCACCTAACATGGATCAGTTCGAAGCGTATTTCAGGAGAGCGGATTTAGATGGTGATGGAAGAATCAGTGGAGCTGAAGCTGTCTCGTTCTTCATGGGATCCAATTTGCCCAAACCCGTCCTTGCTCAGGTATGGAATTATGCTGATCAGGCCAAAACTGGTTTCCTTGGGAGGAATGAGTTTTACAATGCTCTGAGATTGGTAACTGTTGCTCAGAGTAAGCGAGATTTGACGCCTGATATCGTGAAGGCCGCATTATATGGTCCTGCTGCTGCAAAAATCCCTGCGCCTCAGATCAATCTTGCCGCATTACCCCCACCACGCCAGAATGCAGTAGCTCCTGCTGCATCAATGCCGCAGATGGGTGTCACCGCACTACGCCCAAATGCGGTAGCTCCTGCGGTTTCAATGCCGCAGATGGGTGTAACTGCTCCACGCCCGAATTCGGTAGCTCCTGCAGCTTCAATGCCACAGATGGGGGTGACTGCACCGCATCCGAATTCGATTTCGTCTGCAGCTTCAATGACGATGGGTGTAACTGCACCAACATCAACCCAAGGTTTTGCCTACAGAGGGCAAGGATTTCCTGGTCCTGCTGCTAACCAGCAATATTTTCCTTCCCAGCTGGGTCCGACCATGAGACCGCCTCAATCTATGCCAGCTACTAGCGCTCCCCGCCCACAACAGGGGGTTGTAGGCCCGGATATTTCTAAAGGAGTTAATGTGGCTAGCCACAATCTCTCTAATCCTAGCATCTCAAGTGGTTGGAATAGTGGAGGTCCTGGTACAGTTGCTGCTAGGCCTGGAGGACTAGCTCCATCACTTCCCTTATCAACGTCAACACCACCACTCGCTCCTGTTTCACCAATGTCCCAGCCAACAACTGTCAACACAAGAGCGTTATCTGTTTCTGGAAATGGTTTCTCTTCCAATTCAGTCTTGAGAAATGATTTATTCTCAACCACATCATCCACACTGAAACAAGATCCGGCTGGACAGAGTTTTTCATTTAGCAGTTCACCTGCTTCCTCAGCCATTGTTCCAGTGTCTAGTGGTGCCCAACCTGCAACAAAGAAGAATGCTCTTGATTCACTGCAGAGTGCATTCTCAATGCAGCCTGTGGGTAGTCAATTTCAGCGAGGACAGTCTGCTTCACATCCAAGCCAGCAGATTTCACCACCTGCTTCTGCTTCACACCCTAGCCAGCAGATTTCACCACCTGCTTCTTCTCCCCATGCATCATCTGGGATATCAGCTGGACTTGGAAATACTAATTCTGACAATTCACAGCAGTCTTGGCCAAAAATGAAACCTTCTGATGTGCAGAAGTATACAAGGGTGTTTATGGAAGTTGACACTGATAGGGATGGAAAAATCACAGGGGAGCAGGCCCGCAGTCTATTTTTAAGTTGGAGATTACCTATTGATGTCTTAAAGAAGGTGTGGGACTTATCTGATCAGGATAATGATAGTATGCTTTCTTTGAAAGAGTTTTGTTATGCTCTTTATTTGATGGAGAGGTACAGGGAAGGTCACTCTCTTCCGCCAACCCTTCCACATAATGTCATGTTTGATGAGACACTATTGTCTATGTTGGGCCATCCTAAAATTCCTCATGGAGGTGCTGCTTGGGGTATACGCCCAGGTTTTCAGCAGCAACAAGGGACGCCAGGTGCTCGGCCGGTGGCACCAATAGCTGGTTTGAGGCCGCTGGTTCAAGGAACTTCTGTCCAGGTTAGTGGCAATATGCTGCCCAATCAGCAAAAGTCGGGTGCTCCTGTGTTGGAGGATTCCTTTATGAATCGCACAAATAATGGTGAGCAGCATATGCCAAAGCCTCAAGATGCAACTACTACAGAGAAGGCTGAAGAAGCAGAGAATGTGATTTTGGATTCAAAAGAGAAGTTGGAATACTACCGCAACAAAATGCAGGAACTGGTTCTATATAAAAGCAGATGTGATAATAGACTGAATGAGATTACAGAAAGGGCATCTGCGGACAAACGTGAGGCAGAGTTGTTAAGCAAGAAATATGAAGAGAAGTACAAACAGGTAGCAGAAATAGCATCCAAATTGACTGTTGAAGAAGCTAAATTTCGTGATATACAGGAAAGGAAGGTGGAGTTGCAGCAAGCCATTGTCAAAATGGAACAAGGAGGCAGTGCAGATGGTATTCTTCAGGTCCGGGCTGATCGCATACAGTCAGATCTTGAGGAGTTATTTAAGGCTTTGGCTGAACGATGCAAGAAACATGGGATAGATGTGAAGTCAATTGCAATGGTTCAGCTTCCTACCGGATGGCAACCTGGGATTGCAGAGGGAGCAGCTCTTTGGGATGAAGATTGGGATAAATTTGAAGATGAAGGATTTGCCAATGATCTCACTTTTGCAAAACATGCATCTCCAAAATCAAAACCCACCTTCGTTAAAGGAGAGCAAAATTTCCCTGATGACAATTCAGCTTATGGTTCACCTGTGAATGCAAATGGGAAGCAAGAAACTGCTATTAATGGTGATTATGCAGTTGAAGATGAATCTTATACACACAGTGAAGATGGCTTTGCAAGAAGCCCTCGTGGTAGTCCAGCTGGAAGGACTACTGTGGAAGACAGTCCATTTGTGAAAAGTCCTCGAGGAGATGCAGAAACTAGAAGTTTTGATGAATCGACTTGGGGTGCATTCGACAATAATGACGATGTAGACTCTGTGTGGAATTTTCCTGGTACCAAGGACTCTGATGGAGATTTCTTCAAATCTGGTGACTTTGGTATTAACCCAATTAGAACAGGATCTACACATGCAGATGGCATGTTCCAGGCCAAGAGCCCATTTACTTTTGATGATTCGGTGCCTGCAACTCCACTTTCCAAGTTCAGCAACTCTCCGAGATACAGAAACTCCACTTTTGATGATTCAGTACCTGCAACTCCACTTTCCAAGTTTGGCAACTCTCCAAGGTACAGTGAGGCAGGGGATTTCTTTGAGACATCAAGGTTTGATTCAAGGTTCGATTCCTTCAGCATGCATGATGGTGGGTTTTCTCCACAACCAGAGGGGTTTACAAGATTTGATTCCTTTAGTAGCAGCAAGGATTTTGGCTACAGTAGTGAGAATTTCACAAGGTTTGATTCCATAAGTAGCAGCAGCCAAGACTTCGGCTACCATCCTGAGACGTTCACAAGGTTTGATTCCATGAGTAGCAGCAGCAAAGATTTCGGGCATGCAAGGTTTGATTCAATTAGTAGCACCAAGGACTTAGGCCACAGCAGTGCATTCTCTTTCGATGACACTGATCCATTTGGTTCCTCTGGGCCATTTAAGGTTTCTTCAGATACTAATTCTTCGAAGAAGGGTTCTGATAATTGGAGTGCATTCTAG 3387 0.46 MAAPPNMDQFEAYFRRADLDGDGRISGAEAVSFFMGSNLPKPVLAQVWNYADQAKTGFLGRNEFYNALRLVTVAQSKRDLTPDIVKAALYGPAAAKIPAPQINLAALPPPRQNAVAPAASMPQMGVTALRPNAVAPAVSMPQMGVTAPRPNSVAPAASMPQMGVTAPHPNSISSAASMTMGVTAPTSTQGFAYRGQGFPGPAANQQYFPSQLGPTMRPPQSMPATSAPRPQQGVVGPDISKGVNVASHNLSNPSISSGWNSGGPGTVAARPGGLAPSLPLSTSTPPLAPVSPMSQPTTVNTRALSVSGNGFSSNSVLRNDLFSTTSSTLKQDPAGQSFSFSSSPASSAIVPVSSGAQPATKKNALDSLQSAFSMQPVGSQFQRGQSASHPSQQISPPASASHPSQQISPPASSPHASSGISAGLGNTNSDNSQQSWPKMKPSDVQKYTRVFMEVDTDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDNDSMLSLKEFCYALYLMERYREGHSLPPTLPHNVMFDETLLSMLGHPKIPHGGAAWGIRPGFQQQQGTPGARPVAPIAGLRPLVQGTSVQVSGNMLPNQQKSGAPVLEDSFMNRTNNGEQHMPKPQDATTTEKAEEAENVILDSKEKLEYYRNKMQELVLYKSRCDNRLNEITERASADKREAELLSKKYEEKYKQVAEIASKLTVEEAKFRDIQERKVELQQAIVKMEQGGSADGILQVRADRIQSDLEELFKALAERCKKHGIDVKSIAMVQLPTGWQPGIAEGAALWDEDWDKFEDEGFANDLTFAKHASPKSKPTFVKGEQNFPDDNSAYGSPVNANGKQETAINGDYAVEDESYTHSEDGFARSPRGSPAGRTTVEDSPFVKSPRGDAETRSFDESTWGAFDNNDDVDSVWNFPGTKDSDGDFFKSGDFGINPIRTGSTHADGMFQAKSPFTFDDSVPATPLSKFSNSPRYRNSTFDDSVPATPLSKFGNSPRYSEAGDFFETSRFDSRFDSFSMHDGGFSPQPEGFTRFDSFSSSKDFGYSSENFTRFDSISSSSQDFGYHPETFTRFDSMSSSSKDFGHARFDSISSTKDLGHSSAFSFDDTDPFGSSGPFKVSSDTNSSKKGSDNWSAF 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02296 1128 MobiDBLite consensus disorder prediction 326 362 - -
Aip07g02296 1128 Gene3D - 5 96 - -
Aip07g02296 1128 ProSiteProfiles EH domain profile. 443 526 IPR000261 GO:0005515
Aip07g02296 1128 Coils Coil 625 645 - -
Aip07g02296 1128 Pfam EF hand 11 27 IPR002048 GO:0005509
Aip07g02296 1128 SUPERFAMILY EF-hand 4 85 IPR011992 -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 215 298 - -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 377 442 - -
Aip07g02296 1128 Coils Coil 695 715 - -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 1106 1128 - -
Aip07g02296 1128 CDD EH 447 513 IPR000261 GO:0005515
Aip07g02296 1128 PANTHER EH DOMAIN 1078 1128 - -
Aip07g02296 1128 PANTHER EH DOMAIN 971 1038 - -
Aip07g02296 1128 PANTHER EH DOMAIN 3 969 - -
Aip07g02296 1128 SUPERFAMILY EF-hand 431 526 IPR011992 -
Aip07g02296 1128 ProSiteProfiles EF-hand calcium-binding domain profile. 5 40 IPR002048 GO:0005509
Aip07g02296 1128 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 971 1038 - -
Aip07g02296 1128 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1078 1128 - -
Aip07g02296 1128 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 3 969 - -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 1085 1128 - -
Aip07g02296 1128 SMART efh_1 9 37 IPR002048 GO:0005509
Aip07g02296 1128 SMART efh_1 43 71 IPR002048 GO:0005509
Aip07g02296 1128 SMART efh_1 446 474 IPR002048 GO:0005509
Aip07g02296 1128 SMART efh_1 480 508 IPR002048 GO:0005509
Aip07g02296 1128 ProSiteProfiles EH domain profile. 6 96 IPR000261 GO:0005515
Aip07g02296 1128 Gene3D - 425 528 - -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 605 624 - -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 850 893 - -
Aip07g02296 1128 Pfam Cytoskeletal-regulatory complex EF hand 437 509 IPR000261 GO:0005515
Aip07g02296 1128 SMART eh_3 436 531 IPR000261 GO:0005515
Aip07g02296 1128 SMART eh_3 1 94 IPR000261 GO:0005515
Aip07g02296 1128 MobiDBLite consensus disorder prediction 244 263 - -
Aip07g02296 1128 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Aip07g02296 1128 Coils Coil 660 684 - -
Aip07g02296 1128 MobiDBLite consensus disorder prediction 377 441 - -
Aip07g02296 1128 CDD EH 10 76 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02296 Aip-Chr7 95779654 95786719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02296 4 80 EF-hand Containing Proteins AT1G20760 32.468 5.41e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02296 K12472 - gmx:100818930 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02296 07 95779654 95786719 Aip07g02296 07 95779654 95786719 ECH