Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02282 ATGGCCAAGTTGAAGGTAGCTATCAATGGCTTTGGATGCATCGGTAGAAACTTCTTGCGCTGCTGGCACGGTCGCAAGGACTCACCCCTTGATGTGGTTGTTGTGAATGACAGCGGTGGTGTCAAGAATGCGTCGCACTTGCTTAAATATGATTCTATGCTGGGAACTTTCAAAGCAGATGTGAAAATAGTGGATGACCAAACCATTTCCGTGGACGGTAAGCCCATTAAGGTTGTCTCAAACAGGGATCCTCTTAAACTTCCTTGGGCTGAGCTTGGAATTGACATTGTTATTGAGGGAACTAGAGTGTTTGTGGATGGGCCTGGTGCTGGAAAACACATCAAAGCCGGTGCCAAGAAAGTCATCATCACTGCTCCTGCTAAGGGTGCTGATATTCCAACCTACGTCCTCGGAGTCAACGAACAAGACTACGGCCATGATGTTGCCAACATTATAAGTAATGCTTCTTGCACCACAAACTGTCTTGCTCCGTTTGTGAAGATATTGGATGAAGAATTTGGCATTGTGAAAGGAACCATGACAACTACACACTCCTACACAGGAGACCAGAGGCTTTTGGATGCTTCACACAGGGATTTAAGAAGAGCAAGAGCTGCAGCATTGAACATTGTTCCTACAAGCACCGGAGCAGCCAAGGCTGTGTCCTTAGTGCTGCCAAAACTGAAGGGAAAGCTCAATGGAATTGCGCTGCGAGTGCCTACCCCTAATGTCTCAGTAGTTGACCTTGTTATCAATGTTGAGAAGAAGGGTGTTACGGCTGAAGAAGTCAATGCAGCTTTCAGAAAGGCAGCTGAGGGGCCGTTGAAGGGTGTATTGGACGTGTGTGATGTTCCTCTTGTGTCCGTAGACTTCCGCTGCACCGATGTTTCTTCTACTATTGACTCTTCACTCACTATGGTCATGGGAGATGATATGGTTAAGGTTGTTGCTTGGTATGACAATGAATGGGGTTACAGCCAAAGGGTTGTGGATTTGGCACATTTGGTGGCAAACAAGTGGCCCGGAGTAGCTGCTGCAAAGGGAGGTGGAGACCCATTGGAAGAGTTTTGTGAGACAAACCCAGCTGATGAAGAATGCAAAGTCTTTGAATAG 1113 0.4699 MAKLKVAINGFGCIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDDQTISVDGKPIKVVSNRDPLKLPWAELGIDIVIEGTRVFVDGPGAGKHIKAGAKKVIITAPAKGADIPTYVLGVNEQDYGHDVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPKLKGKLNGIALRVPTPNVSVVDLVINVEKKGVTAEEVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKWPGVAAAKGGGDPLEEFCETNPADEECKVFE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02282 370 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 155 162 IPR020830 GO:0016620
Aip07g02282 370 Gene3D Dihydrodipicolinate Reductase; domain 2 156 321 - -
Aip07g02282 370 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 2 370 IPR020831 GO:0016620
Aip07g02282 370 Gene3D - 5 333 - -
Aip07g02282 370 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 331 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Aip07g02282 370 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 5 105 IPR020828 GO:0051287
Aip07g02282 370 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 IPR020831 GO:0016620
Aip07g02282 370 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 151 169 IPR020831 GO:0016620
Aip07g02282 370 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 178 194 IPR020831 GO:0016620
Aip07g02282 370 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 234 251 IPR020831 GO:0016620
Aip07g02282 370 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 IPR020831 GO:0016620
Aip07g02282 370 PIRSF GAPDH 2 340 IPR020831 GO:0016620
Aip07g02282 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 173 IPR036291 -
Aip07g02282 370 SMART gp_dh_n_7 4 157 IPR020828 GO:0051287
Aip07g02282 370 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 2 370 - -
Aip07g02282 370 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 157 320 - -
Aip07g02282 370 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 162 319 IPR020829 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02282 Aip-Chr7 95641249 95644008 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02282 K05298 - pop:7494712 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02282 07 95641249 95644008 Aip07g02282 07 95641249 95644008 ECH