Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02259 ATGGCCACCAACTCTCCCGCCACAGCTCCGCCTCCACCCAAACCGGGTGACCCTCCTTCTTCTTCCACCGAAACCACACCGCCCCCTCCCAAGCAACCACCACAGCCCTCACCTTCTCCGGCGAAGCCCGAAGCCCCATTGTCTGACTCAAAACCCTCCACAGAAGCCACCCTCGTGCTGGTCCCCAGTCACTCGAGATGGTTCTCCTTACATTCCATTCACCAATGCGAGGTCCGCCACCTCCCCGAGTTCTTTGACTCCCCCTCTTCCTCCTCCAAGAACCCTAGGGTTTACAAGTACTACAGGAACTCCATAGTCAAGTACTTCCGTTACAACCCTTCCCGAAAAATCACCTTCACCGACGTCAGGAAAACCCTCGTCGGTGACGTCGGTTCCATCCGCAGAGTCTTCGATTTCCTCGAAGCATGGGGATTGATCAATTACCTTCCGTCTTCGTCCATGAACAAGCCCTTGAAGTGGGACGACAAAGAGTCCAAATCCGAATCTGGATCCAACACTGCCGAACCCCCACCACCTGTTCGAGAAAACACCAAGAGAATCTGCAGCGGATGCAAAGCCGTTTGCACCATTGCTTGCTTTGCTTGTGATAAGTATGATTTGACTCTGTGTGCGAGATGCTATGTTCGTGGGAATTATAGAGTGGGTGTGAGTTCTTCGGATTTTAGGCGAGTTGAGATAAGTGAAGAGACTAAGACGGATTGGAGTGAGAAGGAGACTCTGAATCTTCTGGAAGCCGTTACGCATTATGGTGATGACTGGAAGAGAGTTTCCCAGCATGTTGGTGGCAGGACAGAGAAGGACTGCGTTGCTCATTTCATCAAGCTTCCTTTTGGGGACCAGTTCCTGCGTTATCGAGATGGCGGTGCGACTGACGACACTGCAAATCAGCTGAGGCAGAATGCTGCTGTAGCCGAATGCGATTCAGAAGCTGGTGGTGCAGCCGAGCATAGTAAAAGAATGCGACTCACCCCTCTTGCCGATGCAAGCAACCCTATTATGGCTCAGGCTGCTTTTCTGTCAGCTCTGGCTGGATCAGAGGTTGCATATTCTGCTGCACAAGCTGCAGTGGCAACTCTCTCGGAGGCTTACAAAACAACTAAAAATCATCGATCATTCCCAAGAAACACATCACTACAAGAAGCTGGTATTGCATCTAATGGTGGTACCTCTTCAGATTCATCACAAGCATCTCGATTTCATGCAAATATACTGCTCGAAAAAGAAGAGTTAGATGTGGAAAAGGCAATTTCTGAGATTATTGAAGTTCAGATGAAAAATATCCAAGACAAGCTTCTTCGTTTTGAGAATTCAGACTTGATGATAGAGAAAGAATGCCAGCAGTTGGAGCAAATGAAGAACTTGCTTTTCCTTGATCAGCTTTCTCTTTTATTTCAAAAGCAATCTGCACCAAAATCTGGAGAACGCACAAAGGCAATGGTGTAA 1464 0.487 MATNSPATAPPPPKPGDPPSSSTETTPPPPKQPPQPSPSPAKPEAPLSDSKPSTEATLVLVPSHSRWFSLHSIHQCEVRHLPEFFDSPSSSSKNPRVYKYYRNSIVKYFRYNPSRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYLPSSSMNKPLKWDDKESKSESGSNTAEPPPPVRENTKRICSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVSSSDFRRVEISEETKTDWSEKETLNLLEAVTHYGDDWKRVSQHVGGRTEKDCVAHFIKLPFGDQFLRYRDGGATDDTANQLRQNAAVAECDSEAGGAAEHSKRMRLTPLADASNPIMAQAAFLSALAGSEVAYSAAQAAVATLSEAYKTTKNHRSFPRNTSLQEAGIASNGGTSSDSSQASRFHANILLEKEELDVEKAISEIIEVQMKNIQDKLLRFENSDLMIEKECQQLEQMKNLLFLDQLSLLFQKQSAPKSGERTKAMV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02259 487 ProSiteProfiles SANT domain profile. 236 287 IPR017884 -
Aip07g02259 487 ProSiteProfiles Myb-like domain profile. 233 283 IPR001005 -
Aip07g02259 487 Pfam SWIRM-associated region 1 407 476 IPR032451 -
Aip07g02259 487 SUPERFAMILY Homeodomain-like 56 153 IPR009057 -
Aip07g02259 487 SUPERFAMILY Homeodomain-like 237 287 IPR009057 -
Aip07g02259 487 Pfam SWIRM domain 62 148 IPR007526 GO:0005515
Aip07g02259 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 238 282 IPR017930 -
Aip07g02259 487 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 1 482 - -
Aip07g02259 487 MobiDBLite consensus disorder prediction 1 45 - -
Aip07g02259 487 PANTHER SWI/SNF COMPLEX-RELATED 1 482 - -
Aip07g02259 487 Gene3D - 236 286 - -
Aip07g02259 487 ProSiteProfiles SWIRM domain profile. 59 157 IPR007526 GO:0005515
Aip07g02259 487 MobiDBLite consensus disorder prediction 1 54 - -
Aip07g02259 487 Coils Coil 412 432 - -
Aip07g02259 487 SMART sant 237 285 IPR001005 -
Aip07g02259 487 CDD SANT 241 282 IPR001005 -
Aip07g02259 487 Gene3D - 65 151 IPR036388 -
Aip07g02259 487 MobiDBLite consensus disorder prediction 160 183 - -
Aip07g02259 487 Pfam Myb-like DNA-binding domain 239 282 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02259 Aip-Chr7 94678663 94681048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02259 188 279 EF-hand Containing Proteins AT3G07740 33.333 3.14e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02259 K11649 - gmx:100779777 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02259 07 94678663 94681048 Aip07g02259 07 94678663 94681048 ECH