Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02066 ATGGCGCCCAATTTGAGCCTCCGAAATGTGGTTCCGTCGTTGTGTCTTCTCCTGGTGCTCATCGGGAGAGGCCAACGAGCATGGGCCCACGACTACGTGGACGCATTGTCGAAGGCCATCCTGTTCTTCGAGGGACAGCGTTCGGGCTTCCTGCCAGAGGATCAGAGACTCAAGTGGCGAGCCCATTCGGGCCTCAGTGATGGCTGGACCTACAACGTGGACCTCACCGGGGGTTATTACGACGCCGGCGACAACGTGAAGTTCGGGTTTCCGATGGCATTCACGACGACAATGCTGTCGTGGAGCGTCGTTGAATTTGGGGAGATGATGCCACCAGAGGAGCTCAGAAATGCCAGAGTTGCAATCCGCTGGGCCACTGATTATTTGCTCAAGACCGTTTCCCAGCCCAACCGCATTTTCGTTCAGGTGGGTGACCCAATCTCAGACCACAACTGTTGGGAGAGGCCAGAAGACATGGACACATCCAGGGCCGTGTATGCTGTTGACGCACCAAACCCGGCTTCTGACGTTGCCGGGGAAACTGCGGCGGCACTGGCAGCTTCATCGATGGTGTTCCTATCATCTGACCCCGGTTATTCAGAGACATTGCTGCGAAATGCCGTTAAGGCCTTTCAGCTTGCGGATAACTATAGGGGTGCCTACAGTGACAATTCTGATGTTAAGGGTGGTGTCTGTCCATTTTATTGTGACTTTGATGGCTATCAGGACGAATTGTTATGGGGAGCCGCATGGCTAAGGAGGGCCACGAAGGACGATAATTTCCTGAACTACATTCAAAGCAATGGCAAAACGCTTGGTGCTGAGGATAATATCAATGAGTTCGGTTGGGACAACAAGCATGCTGGGCTCAACGTTCTTGTCTCCAAGGAAGTGGTAGAAGGAAACGTATATTCTCTAGAATCATATAAGGCCTCAGCAGAGAGCTTTCTGTGCACATTGATACCAGAAACAGCAGCAAGCTCTCACATAGAGTACTCCCCCGGTGGACTGATATACAGGCCAGGTGGCAGCAACTTACAGCACGCAACTTCAATCGCTTTCCTTGAATTGGTTTATGCTAACTACCTCTCTCGCACCTCTCAAGACATAAACTGCGGCAACGTTTATGTTAGTGCCCAGACACTTCGCCAGCAAGCAAAGAAACAAGTTGATTACATCCTGGGGGATAATCCAATGAGGCTATCGTACATGATTGGGTACGGCAACAATTATCCACAGCGAATCCATCATCGCGGCTCTTCTTTGCCCTCTGTCAAGGATCATCCTCAGGTGATCGCTTGCAAAGAGGGTTCAACCTATTTTAACTCGACGGGTCCTAACCCGAATGTTCTTGTTGGAGCTGTTGTGGGAGGACCAGGACAAGATGACGTATATGTGGATGATAGGGCTGATTTTAGGAAGTCCGAGCCTACCACATATATTAATGCTCCATTTGTTGGGGTTTTGGCATACTTTGCTGCTAATCCCAATCCGTGA 1497 0.507 MAPNLSLRNVVPSLCLLLVLIGRGQRAWAHDYVDALSKAILFFEGQRSGFLPEDQRLKWRAHSGLSDGWTYNVDLTGGYYDAGDNVKFGFPMAFTTTMLSWSVVEFGEMMPPEELRNARVAIRWATDYLLKTVSQPNRIFVQVGDPISDHNCWERPEDMDTSRAVYAVDAPNPASDVAGETAAALAASSMVFLSSDPGYSETLLRNAVKAFQLADNYRGAYSDNSDVKGGVCPFYCDFDGYQDELLWGAAWLRRATKDDNFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVVEGNVYSLESYKASAESFLCTLIPETAASSHIEYSPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQDINCGNVYVSAQTLRQQAKKQVDYILGDNPMRLSYMIGYGNNYPQRIHHRGSSLPSVKDHPQVIACKEGSTYFNSTGPNPNVLVGAVVGGPGQDDVYVDDRADFRKSEPTTYINAPFVGVLAYFAANPNP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02066 498 SUPERFAMILY Six-hairpin glycosidases 18 494 IPR008928 GO:0005975
Aip07g02066 498 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Aip07g02066 498 PANTHER ENDOGLUCANASE 24 14 497 - -
Aip07g02066 498 Gene3D - 28 495 IPR012341 GO:0005975
Aip07g02066 498 Pfam Glycosyl hydrolase family 9 32 489 IPR001701 GO:0004553|GO:0005975
Aip07g02066 498 PANTHER ENDO-1,4-BETA-GLUCANASE 14 497 - -
Aip07g02066 498 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 465 483 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02066 Aip-Chr7 65263744 65266795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02066 10 495 Glycoside Hydrolase AT1G70710 60.082 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02066 K01179 - gmx:100799911 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02066 07 65263744 65266795 Aip07g02066 07 65263744 65266795 ECH