Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02059 atgatgggagTAGCTAAACTCTTCGACGACACCATTCATCTCCCCCACTCGCTTGTCGCATCAGAAGATCAAGCTACCACCCTCCGTGTGCTGAGCTCTTCTGAGATAGATTCAGTATCTCGCCATTCTCCATACTCGAATCCGAAGGAAGGAGGCTGCGGCTGGTGGTGTTGGTTGTGGTGGTGCCGAGACAATTTGTGTAAGAACTGCAAGAGACCTGGTCATTATGCTAGGGAATGCCCAAATGTTGCAATTTGCCACAATTGTGGACTCCCTGGGCACATTGCTTCTGAATGCACCACAAAATCGTTGTGCTGGAATTGTAAAGAACCTGGGCACGTGGCTAGCAACTGTCCAAATGAAGGCATCTGTCATACCTGTGGTAAAGTTGGACATCGCGCAAGGGAGTGCACAGCACCTCCAATGCCACCAGGGGACTTGAGGTTGTGCAACAACTGTTATAAACAGGGTCATATTGCAGCTGAATGCACCAATGAGAAAGCATGCAACAACTGTAGGAAGACAGGACACCTGGCACGTGATTGTCCAAATGATCCCATTTGTAACTTGTGCAATGTTTCTGGGCATGTAGCTAGACAGTGTCCAAAAGCTAACATGCTTGGAGATCGTGGCACCAGTGGCGGTATGCGTGGGGGTGGTGGTGGTTACCGAGATGTTGTATGCCGGAATTGCCAGCAATTGGGTCACATGAGTCGGGACTGCATGGGACCTCTGATGATTTGTCACAATTGTGGAGGTCGTGGTCACCTGGCATATGAGTGCCCTTCAGGTCGATTTGTGGATCGTTATCCCAGGCGGTACTGA 825 0.4945 MMGVAKLFDDTIHLPHSLVASEDQATTLRVLSSSEIDSVSRHSPYSNPKEGGCGWWCWLWWCRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHVASNCPNEGICHTCGKVGHRARECTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANMLGDRGTSGGMRGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFVDRYPRRY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 86 99 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 150 165 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 188 203 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 105 120 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 124 137 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 228 241 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 105 120 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 66 82 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 168 184 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 123 138 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 86 100 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 247 263 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 187 203 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Pfam Zinc knuckle 227 241 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 Gene3D - 123 166 - -
Aip07g02059 274 Gene3D - 167 219 - -
Aip07g02059 274 Gene3D - 101 122 - -
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 248 263 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 PANTHER OS10G0545300 PROTEIN 62 274 - -
Aip07g02059 274 SUPERFAMILY Retrovirus zinc finger-like domains 145 185 IPR036875 GO:0003676|GO:0008270
Aip07g02059 274 Gene3D - 222 265 - -
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 67 82 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 ProSiteProfiles Zinc finger CCHC-type profile. 169 184 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 187 203 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 168 184 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 227 243 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 123 139 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 66 82 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 247 263 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 104 120 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 85 101 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SMART c2hcfinal6 149 165 IPR001878 GO:0003676|GO:0008270
Aip07g02059 274 SUPERFAMILY Retrovirus zinc finger-like domains 62 102 IPR036875 GO:0003676|GO:0008270
Aip07g02059 274 SUPERFAMILY Retrovirus zinc finger-like domains 103 141 IPR036875 GO:0003676|GO:0008270
Aip07g02059 274 PANTHER - 62 274 - -
Aip07g02059 274 Gene3D - 63 100 - -
Aip07g02059 274 SUPERFAMILY Retrovirus zinc finger-like domains 218 264 IPR036875 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02059 K09250 - gmx:100803820 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02059 07 64350002 64353771 Aip07g02059 07 64350002 64353771 ECH