Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01982 ATGATGAGTGACGACGCAGATTTCACGATCTCCCTCCTCCACCACCACAATCTCATCATCGTCCTCGCCGTCCTCATCATCGGCGCCACTCTCTACATCATCACCCGCCCCAGGTCCATCTACCTCCTCGATTCGTCCTGCTTCGGCCCACCGGACTACCTCCGCGTCGACTACAACCGCTTCATGGAACATTCCAGACTCACGGGGGAATTTGACGACTGTGCGCTTGAATTCCAGCGCAAAATCTTGCAGCGCTCTGGTCTTGGTGAAGAAACCTACTTCCCCGAAGCTATGCATGCCATCCCTCCAAACCCCTCCATGGCCGCCGCAAGACAAGAAGCCCAACAGGTCATGTTTGGCGCGCTCGACAATCTCTTTGCCAACACCGGCATCAAGCCGAAACAAATTGGAATCCTCATCGTGAATTGCAGCTTGTTCAACCCTACACCTTCTCTTTCCGCCATGATCGTCAACAAGTACAAGCTCAGGGAGAACACAAGGACCTACAATATTTCCGGGATGGGTTGCAGTGCAGGAGTGATAGCCATCGATATCGCCAAAGACTTGCTTCAAGTTCATAGAAACACCTACGCCGTGGTGGTGAGCACAGAGAACATCACGCAGAATTGGTACTTGGGGAACAAGAAATCAATGCTCATCCCTAATTGCTTGTTCCGGATGGGCGCTTCTGCGGTGCTTCTCTCCAACAAAAGCTCCGATAGGCGGCGTTCAAAGTACAAGCTTCTTCATGTAGTGAGAACGCACAAAGGTTCAGATGACAAGGCCTACAAATGCGTGTTTCAGGAAGAGGACGATGAAGGCAAAACAGGGGTTACGCTTTCCAAAGATCTGATGACCATTGCTGGTGAGGCTCTCAAGACTAACATAACCACGCTGGGTCCATTGGTGCTTCCCATAAGTGAGCAGCTTCTGTTCTTCGTTACGCTGGTTGCAAAGAAGATGTTGAATACGAAGGTGAAGCCTTACATCCCGGATTTCAAGCTGGCTTTCAGCCATTTCTGTATCCATGCGGGGGGGAGGGCGGTGATCGACGAGCTGGAGAAGAATCTGCAGCTGAGGGCAGAGCACGTGGAAGCTTCTAGAATGACGCTGCATAGGTTCGGGAACACGTCATCGAGTTCGATATGGTACGAGTTGGCGTACACGGAGGCGAAGGGGAGAGTGAGGAAGGGACACAGAGTGTGGCAGATAGCTTTCGGGAGTGGGTTCAAGTGTAACAGTGCTGTTTGGGTTGCTCTGAAAAATGTTAAGCCTTCTCCCAAGAATCCATGGGAAGATTGCATTCATAGCTACCCTGTTCAGCTTCTCACTTAA 1335 0.5124 MMSDDADFTISLLHHHNLIIVLAVLIIGATLYIITRPRSIYLLDSSCFGPPDYLRVDYNRFMEHSRLTGEFDDCALEFQRKILQRSGLGEETYFPEAMHAIPPNPSMAAARQEAQQVMFGALDNLFANTGIKPKQIGILIVNCSLFNPTPSLSAMIVNKYKLRENTRTYNISGMGCSAGVIAIDIAKDLLQVHRNTYAVVVSTENITQNWYLGNKKSMLIPNCLFRMGASAVLLSNKSSDRRRSKYKLLHVVRTHKGSDDKAYKCVFQEEDDEGKTGVTLSKDLMTIAGEALKTNITTLGPLVLPISEQLLFFVTLVAKKMLNTKVKPYIPDFKLAFSHFCIHAGGRAVIDELEKNLQLRAEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRVRKGHRVWQIAFGSGFKCNSAVWVALKNVKPSPKNPWEDCIHSYPVQLLT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01982 444 PIRSF Very_long_ch_3-ktacl-CoA_syn 3 444 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aip07g01982 444 Gene3D - 59 418 IPR016039 GO:0016746
Aip07g01982 444 SUPERFAMILY Thiolase-like 249 417 IPR016039 GO:0016746
Aip07g01982 444 Pfam FAE1/Type III polyketide synthase-like protein 33 321 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aip07g01982 444 SUPERFAMILY Thiolase-like 27 244 IPR016039 GO:0016746
Aip07g01982 444 PANTHER 3-KETOACYL-COA SYNTHASE 4 17 443 - -
Aip07g01982 444 CDD CHS_like 22 417 - -
Aip07g01982 444 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 338 417 IPR013747 -
Aip07g01982 444 PANTHER 3-KETOACYL-COA SYNTHASE 17 443 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01982 Aip-Chr7 57495785 57497119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01982 17 442 Miscellaneous Gene Families AT1G19440 79.343 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01982 K15397 - fve:101298755 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01982 07 57495785 57497119 Aip07g01982 07 57495785 57497119 ECH