Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01957 ATGACTCCCTACATTGCGGGCGTCGTAGTCCCTCTCCTAGTCACCCTCCTCGTCCGCAACGCCTCCGGCGGCGGCGGCGGCGGCAGAAGAAAGCGGCGCGCCGTGCCAGCAGACGTGGGAGGGGAGAAGGGCCTGGCAGTGAGGAACCGGCGCTTCGAGTCACTTGTGGAGACGTCATGGGAGGGGGCCGCGACGCTGGCGGAGCTATTTGAGATGACTTGCAGGCGGCATGCGGAGCGACTGCTGCTAGGGACACGGCGGCTGGTGTCGAGGGAGGTGGTGAGGTATTTTTTTTTTAATTTCTTTTTTTTTTGGTCGATTTTGCTTTTCTTTATTTTATTTTCCTTTCATATGCACCTTCAGGGTTGCTTCCGGCGAAATGTGACAGTTGTGACTATTTATGCATCATTGGGGGAGGAAGCGTTATGTCACTCACTCAATGAGACAGAGGTTACAACAGTGATATGTGCCCAAAAAGAACTGAAGACACTTGTACGTATTAGTGGACAACTTGATTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGAAGCCTCATCTGTTGAGCATGGCTGGATCGTAACTTCTTTTGCTAATGTAGAGAAGCTTGGTAGAGAAAACCCTGTTGATGCTGATTTACCTCATCCCGCTGATGTTGCCGTTATAATGTACACAAGTGGAAGTACAGGTTTACCTAAGGGTGTGATGATGACACATGCCAATGTCTTAGCAACTGTCTCTGCTGTGATGACAATTGTTCCTGACCTTGGGAGAAATGACACATATCTAGCATACTTACCAATGGCCCATATCCTTGAATTAGCAGCTGAGAATTTGATTGCAGCTTGTGGAAGTGCAATAGGATATGGATCTCCTCTGACCTTAACAGATACATCAAACAAGATTAAGAAAGGAACAAAGGGGGATGCTACAGTGTTGAAGCCATCATTAATGGCAGCAGTACCAGCAATCCTTGATCGAGTGCGTGATGGAGTGTTCAAGAAGGTAAATGCAACTGGAGGGTTGTCAAAGAAGTTGTTCAACTTAGCCTATGCTCGCAGGTTGCAAGCAGTTAATGGTAGCTGGCTTGGAGCTTGGGGCTTGGAGAAGGCACTTTGGGACTTTCTTGTGTTTAGAAAGGTCCGGGCAATTCTAGGGGGTCGTATCCGTTTTATATTGTCTGGTGGTGCTCCTCTTTCTGGTGATACACAGAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTGACAGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGATACATCTGTTGGTCGTGTTGGACCACCTCTTCCATGCTCATTTATTAAGCTAATTGATTGGCCTGAAGGTGGGTATCTAACAAAAGACTCACCCATGCCCCGGGGTGAAATTGTAATTGGTGGTCCAAACATATCGCTTCTTATTTTCCTAGGGGCACTCTTTCTCTTTTGCTTAGCAAATTTCAAAGTTCTATTTGCAGCATATATTTAG 1524 0.4678 MTPYIAGVVVPLLVTLLVRNASGGGGGGRRKRRAVPADVGGEKGLAVRNRRFESLVETSWEGAATLAELFEMTCRRHAERLLLGTRRLVSREVVRYFFFNFFFFWSILLFFILFSFHMHLQGCFRRNVTVVTIYASLGEEALCHSLNETEVTTVICAQKELKTLVRISGQLDSVKRVICMDDDIPSEASSVEHGWIVTSFANVEKLGRENPVDADLPHPADVAVIMYTSGSTGLPKGVMMTHANVLATVSAVMTIVPDLGRNDTYLAYLPMAHILELAAENLIAACGSAIGYGSPLTLTDTSNKIKKGTKGDATVLKPSLMAAVPAILDRVRDGVFKKVNATGGLSKKLFNLAYARRLQAVNGSWLGAWGLEKALWDFLVFRKVRAILGGRIRFILSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSFIKLIDWPEGGYLTKDSPMPRGEIVIGGPNISLLIFLGALFLFCLANFKVLFAAYI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01957 507 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 93 - -
Aip07g01957 507 Gene3D - 108 487 IPR042099 -
Aip07g01957 507 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 117 487 - -
Aip07g01957 507 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 117 487 - -
Aip07g01957 507 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Aip07g01957 507 Pfam AMP-binding enzyme 118 482 IPR000873 -
Aip07g01957 507 SUPERFAMILY Acetyl-CoA synthetase-like 60 483 - -
Aip07g01957 507 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 29 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01957 Aip-Chr7 55259090 55268386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01957 120 487 Acyl Lipid Metabolism Gene Families AT1G77590 79.891 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01957 K01897 - gmx:100803677 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01957 07 55259090 55268386 Aip07g01957 07 55259090 55268386 ECH