Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01956 ATGGATAAGAAGAGATGGTTATGGAAACATAACTCTTCCAAGAAGGGTCCTGGCGAAACCGATAGCTCTGGATCAGTATCATCTCATTCTGAGGAAGGATCGAAGGAATCTCCAAATGGAAGTAGCCTGTCCCCTGCTGTCACCTCAAAAACCGCAGCCTGGGCAAATGATGCAAATTGTCCATTTTCTAATGAACAATTGCCTGTAGAAACTTCAAAACCTCTATCTACTGCAGGTATGATGAACGATGGTTTGCTAGAGAAAGATGAACATGGAGAAAATGAAAATATAAAAAATGTAGAGGAAGGTTATCTTATGTCGAAGAAGCTATCTGCAGCGCTCGTCAATGTCAATACCAAAGAAGATTTGGTTAAGCAGCATGCGAAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAAATGAAGTGTCATTTTTGAAGAAGCAACTTGAAGCAGCAACTCACAAGAGTTCCACTCTGGAAGATCGAGTCACCCATCTTGATGGTGCACTTAAGGAGTGTGTTAGGCAGTTAAGACAGACAAGAGAAAAGCAGGAAGAGAATATGGGTGATGCAATAGAACAGCGGACTTGTGACTTGGAATTGGCCAAAATTAAACTTCAGAGAAGAGTTTCTGAGCTCCAGAGCAAATTAGAGGCTTGTAATGCCAAATCTTCTGTTGATCTTGAATTTTGTCACAAGGTTGAGCTTTTGGAGAAAGAGAACATGGCTCTCCGGCAGGAACTCTTGGCTCAATCAGAAGAGCTGGAAATGAGGACAATTGAGAGAGATTTAAGTACTCAAGCTGCTGAGACAGCTAGCAAGCAATACTTAGAAAGCATCAAGAAAATAGCCAAGCTGGAGGCTGAGTGCCGGAGACTGAAGAGCATTGCTTCAAGAGCTTCTGTAGTTAATGATCATAAATCTGCTGTTTCATCCTCATTTTGTGTTGAGTCTTTCACAGACAGTCAATCAGACAGTGGGGAGCAACTTAATGCAGTTGAGATTGATACCCACAAGACAACCTGCTCAGACCCGAACAAGTGTGAGCCGAGTTGTTCTGATTCATGGGCATCTGCATTAATAGTCGAGCTTGATCAGTTTAAGAATGAAATGTCCCGACAAACTCCAACCAATTCTGTTAAACTTGATCTCATGGATGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCTGAGACCAAGAATGAAAGCCATGTCCAGGAGTCAGTTGTTGACGATCACTGCATTATTGAGAAAAGCTCTCCCGGAGCACAGTTTGAGATCATGAATAAACAAATGGATGAACTAAGAGAGAAGTTAGAGAAGGTTGAATTGGAAAAAGCTGAACTAGAGATGGCTTTGATGAAAAGTGAAGAGTCTATTAAGGAGTCGCAGCATCAGATGAGTTACACAGAAAAAAAAGTGGAGGAGTTGCAAGAGGAACTTGAAAATGCCTACAAATCAAAAGAAATGATAGAAAATTACCTGATTAGCATGGAGGCAGAAGCTCAAACATTATCAGCAAAGGTTGATGTATTAGAAGCAGAGGTAGATAAGGAGAGGGCCGTGTCGGAAGAAATTGCGATGAAGTTTAAGGTGTTGGAGCAAGAGCTACAAACCAAATCTGCAGAGGTTGACGTATTAGAAGCAGAGGTTAATAAGGAGAGGACTGCATCTGATAAAATGGTGACCAAGTGTAAGGACTTGGAGGAAAAGCTAAAAACTAAATCTGCAGATGTTGACATATTAGAAGCAGAGGTTAATAAGGAGAGGGTTGCTTCGGATAAAATCATGACCAAGTGTAAGGACTTGGAGGAAGAGCTAAAATCCAAATCTGCAAAGCTTGACTTATTAGAAGCAGAGGTAGATAAAGAAAGAGCTGTGTCAGAAGAAATTGCAATGAAATTTAAGGATTTGAAGGAAGAGCTAGAAAGCAAGAAGCAGGAAGAGATACTTAGATCAACAAGTAGCTCTTATGCAGAAAAGAAGATAAAGCAGGAGGATCTAGCTCTGGCTGCCGGAAAGCTTGCAGAGTGCCAGAAAACAATAGCTTCCCTGGGGAACCAGTTAAAATCCCTAGCTACACTGGAAGATTTCTTTATTGACACTGCTAGCATTCCAGCAAGTCCGTCGCTTGTTGCTCAAGCCAGTGGCGAGTTATGGAAGCTGCATTCCAACGACACATTTTCACCGAAAAGAGATTCCAATACTTCAGGGTTGGCTGTTGGGAGCTCTGGCCAATCCTTAAACAAAAACGAAGAGAGCTTGCCGCCTTTGTCATCTTCATCAACTTCTTTGGCTGCCCTCACACCAAACCATGTCGGTTCTGAGAAGAGTCGAAATGGTTTTGCAAAATTTTTCTCTAGAACAAAGAGTGGGATCAGATTGGAAATTTAG 2406 0.4185 MDKKRWLWKHNSSKKGPGETDSSGSVSSHSEEGSKESPNGSSLSPAVTSKTAAWANDANCPFSNEQLPVETSKPLSTAGMMNDGLLEKDEHGENENIKNVEEGYLMSKKLSAALVNVNTKEDLVKQHAKVAEEAIAGWEKAENEVSFLKKQLEAATHKSSTLEDRVTHLDGALKECVRQLRQTREKQEENMGDAIEQRTCDLELAKIKLQRRVSELQSKLEACNAKSSVDLEFCHKVELLEKENMALRQELLAQSEELEMRTIERDLSTQAAETASKQYLESIKKIAKLEAECRRLKSIASRASVVNDHKSAVSSSFCVESFTDSQSDSGEQLNAVEIDTHKTTCSDPNKCEPSCSDSWASALIVELDQFKNEMSRQTPTNSVKLDLMDDFLEMERLVALPETKNESHVQESVVDDHCIIEKSSPGAQFEIMNKQMDELREKLEKVELEKAELEMALMKSEESIKESQHQMSYTEKKVEELQEELENAYKSKEMIENYLISMEAEAQTLSAKVDVLEAEVDKERAVSEEIAMKFKVLEQELQTKSAEVDVLEAEVNKERTASDKMVTKCKDLEEKLKTKSADVDILEAEVNKERVASDKIMTKCKDLEEELKSKSAKLDLLEAEVDKERAVSEEIAMKFKDLKEELESKKQEEILRSTSSSYAEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFFIDTASIPASPSLVAQASGELWKLHSNDTFSPKRDSNTSGLAVGSSGQSLNKNEESLPPLSSSSTSLAALTPNHVGSEKSRNGFAKFFSRTKSGIRLEI 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01956 801 Coils Coil 206 226 - -
Aip07g01956 801 Coils Coil 597 652 - -
Aip07g01956 801 MobiDBLite consensus disorder prediction 17 78 - -
Aip07g01956 801 SUPERFAMILY Tropomyosin 428 644 - -
Aip07g01956 801 MobiDBLite consensus disorder prediction 733 769 - -
Aip07g01956 801 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g01956 801 Coils Coil 138 165 - -
Aip07g01956 801 Coils Coil 569 589 - -
Aip07g01956 801 MobiDBLite consensus disorder prediction 731 769 - -
Aip07g01956 801 Coils Coil 272 292 - -
Aip07g01956 801 Pfam Filament-like plant protein, long coiled-coil 585 698 IPR008587 -
Aip07g01956 801 Pfam Filament-like plant protein, long coiled-coil 120 226 IPR008587 -
Aip07g01956 801 Pfam Filament-like plant protein, long coiled-coil 352 409 IPR008587 -
Aip07g01956 801 Pfam Filament-like plant protein, long coiled-coil 235 299 IPR008587 -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 536 579 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 571 614 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 610 800 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 489 544 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 1 494 - -
Aip07g01956 801 Coils Coil 237 257 - -
Aip07g01956 801 Coils Coil 534 561 - -
Aip07g01956 801 Coils Coil 429 526 - -
Aip07g01956 801 MobiDBLite consensus disorder prediction 1 81 - -
Aip07g01956 801 Coils Coil 177 197 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 536 579 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 494 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 610 800 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 571 614 - -
Aip07g01956 801 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 489 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01956 Aip-Chr7 55101387 55107267 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01956 - - mtr:MTR_1g030010 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01956 07 55101387 55107267 Aip07g01956 07 55101387 55107267 ECH