Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01948 ATGAGTATCTGTCTCAACCTCAGAACATTGCTTCTTAACTTTGTTATTACCTTCACAATGCTTTCTCTATCTCATGAAGCAAGACAAAATCTCGATTCCCCTGTGAGAGCAGTTAGTCTTGGTGGTTGGCTCGTTACTGAAGGTTGGATCAAACCTTCTCTCTTCGATGGAATTCCAAACAAGGATTTCTTGGATGGAACTGGTCTTCAGTTCAAGTCTGTGACAACAGGGAAGTATCTGTGTGCAGAGTCCGGAGGAGGAACGATCCTAGTTGCAAACCGCACTGCCGCTTCGGGCTGGGAAACATTCAGGTTATGGAGGCTGAACGAGACCACTTTCAGATTCAGGGTGTTCAACAAGCAGTTTGTGGGATTAGATGGGATCAACGTTGTAGCTATTACCAATATTTCAACTGATTCTTTAACTTTCAATATTGTTAAGGAAAGTAATAAATCTAACCGCGTTCGAATCAAAACAACTAGTGGTAGCTATTTGCAGGCAAAGTCGGAGGTGATGGTGACTGCAGACATTTCAAAGGTAAGCGGATGGAGAGACGATGACCCAACAGTATTCCAACTGACAATTGGTGGAAGGATGCAAGGTGAGTTCCAGGTCACCAATGGTTATGGCCCACTCAAGGCTCCCCAAGTCATGAAGGACCACTGGAACAGTTTCATTGTTGAAAATGATTTGAAGATGATAGCGAGTAAGGGAATAAATGCACTTAGAATTCCGGTTGGATGGTGGATAGCAAGTGATCCAACTCCACCCTCTCCTTATGTTGCTGGTTCCTTGCATGCTCTAGACAATGCCTTCTTCTGGGCTCAGAAATATGGGTTGAAAATTATCATTGATCTTCACGCTGCACCTGGTTCCCAAAATGGGTATGAGCATAGCTCCTCCAGAGACACTTCTCAAGAATGGGGGAAAACAGATGAGAACATCCAACAAACCGTTAATGTTATAGAGTTCTTAGCTGCAAGGTACGCAAAAAGCACAAGCCTGTATGCGGTTGAGCTGATAAACGAGCCTCTATCACCAGGTGCCACCTTAGAGGCTTTGAACAAGTACTACAAAGCTGGGTATGAAGCAGTGCGCAAACACTCAAAGACAGCTTATGTTGTTTTGTCAAATCGGTTAGGGTCCTCAGACCCAAGGGAATTCTTCCCTGTTGCCACTGGCCTTATGAAAACAGTGATTGATGTCCACTACTACAGCCTCTTTGAATCCAAATTTGACAACTAA 1245 0.441 MSICLNLRTLLLNFVITFTMLSLSHEARQNLDSPVRAVSLGGWLVTEGWIKPSLFDGIPNKDFLDGTGLQFKSVTTGKYLCAESGGGTILVANRTAASGWETFRLWRLNETTFRFRVFNKQFVGLDGINVVAITNISTDSLTFNIVKESNKSNRVRIKTTSGSYLQAKSEVMVTADISKVSGWRDDDPTVFQLTIGGRMQGEFQVTNGYGPLKAPQVMKDHWNSFIVENDLKMIASKGINALRIPVGWWIASDPTPPSPYVAGSLHALDNAFFWAQKYGLKIIIDLHAAPGSQNGYEHSSSRDTSQEWGKTDENIQQTVNVIEFLAARYAKSTSLYAVELINEPLSPGATLEALNKYYKAGYEAVRKHSKTAYVVLSNRLGSSDPREFFPVATGLMKTVIDVHYYSLFESKFDN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01948 414 Gene3D - 47 185 - -
Aip07g01948 414 SUPERFAMILY (Trans)glycosidases 35 410 IPR017853 -
Aip07g01948 414 PANTHER FASCIN 13 414 IPR010431 GO:0007015|GO:0051015
Aip07g01948 414 PANTHER PUTATIVE-RELATED 13 414 - -
Aip07g01948 414 Gene3D Glycosidases 186 414 - -
Aip07g01948 414 SUPERFAMILY Actin-crosslinking proteins 69 183 IPR008999 -
Aip07g01948 414 Pfam Cellulase (glycosyl hydrolase family 5) 222 406 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01948 Aip-Chr7 54559756 54568956 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01948 - - adu:107459119 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01948 07 54559756 54568956 Aip07g01948 07 54559756 54568956 ECH