Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01941 ATGAGTGTGGATTTAAAGAAAACTACCTCTAATGGCCATGAGAAAATGTTAAGCTTAGAAGAGCAGCAGTCCCTGATAATGGAGGTCAGAAGGTTGATTGGACCACTGTCTGGTAAGGCATCTCTTTATTGTTCTGATGCATCCATTGCAAGGCATTTGAGGGCACGGAATTGGAATGTCAAGAAGGCGGTTAAAATGTTGAAACAGACACTAAAATGGAGAGCAGAATACAAACCAGAAGAGATCCGATGGGAAGATGTTGCTCAGGAAGCGGATACTGGAAAGATCTACAGAACAGATTACGTTGACAAGCATGGGAGAACAGTCCTTGTCATGAGACCTAGCCGCCAGAACTCGAAGTCGATAAAAGGACAGGTTAAATATTTGGTATACTGCATGGAGAATGCTATTCTAAATCTTCCACCACATCAGGAACAGATGGTCTGGCTAATTGACTTCCAGGGTTTCAATTTGTCACATATATCAGTCAGGGTGACCCGTGAAACTGCACATATATTGCAAGATCAGTATCCTGAACGTCTGGGTCTTGCAATACTGTACAATCCACCTAAGTTCTTTGAACCATTCTTCACGATGGTAAAGCCCCTATTGGAGCCTAAGACTTACAATAAAGTGAAGTTTGTTTACGCTGATGATAACAATACCAAGAAGATCATGGAGGATTTATTTGATTTGGACCAACTTGAATCTGCATTTGGCGGGAAGAATGACACAGGGTTTGACATAAACAGGTATGCGGAGAGGATGAAAGAGGACGACAAGAAGATTCCCTCTTTCTGGACAGGGGAGAACTCTCTGTCATCAGTTCCAGTTGCTCCTCCATCGTTAGATTCAATTAAGTTAGATTCTGATTCTGACCCATCTGACAACGAGAAGAGAGAATCTTCCCCTGACTTAGACCCTGACCCTAGAATGGACACCGAGATCGTTAACCATAATGATGATAATGTCTTGGTTAATCAAGAGTATGGAAACGCCAGAGTCGATACGCATTAA 1017 0.4238 MSVDLKKTTSNGHEKMLSLEEQQSLIMEVRRLIGPLSGKASLYCSDASIARHLRARNWNVKKAVKMLKQTLKWRAEYKPEEIRWEDVAQEADTGKIYRTDYVDKHGRTVLVMRPSRQNSKSIKGQVKYLVYCMENAILNLPPHQEQMVWLIDFQGFNLSHISVRVTRETAHILQDQYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTYNKVKFVYADDNNTKKIMEDLFDLDQLESAFGGKNDTGFDINRYAERMKEDDKKIPSFWTGENSLSSVPVAPPSLDSIKLDSDSDPSDNEKRESSPDLDPDPRMDTEIVNHNDDNVLVNQEYGNARVDTH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01941 338 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Aip07g01941 338 Pfam CRAL/TRIO domain 94 241 IPR001251 -
Aip07g01941 338 Gene3D - 3 270 IPR036865 -
Aip07g01941 338 MobiDBLite consensus disorder prediction 320 338 - -
Aip07g01941 338 MobiDBLite consensus disorder prediction 264 338 - -
Aip07g01941 338 CDD SEC14 92 242 IPR001251 -
Aip07g01941 338 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Aip07g01941 338 SUPERFAMILY CRAL/TRIO N-terminal domain 20 86 IPR036273 -
Aip07g01941 338 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Aip07g01941 338 SMART sec14_4 90 244 IPR001251 -
Aip07g01941 338 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Aip07g01941 338 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 303 - -
Aip07g01941 338 MobiDBLite consensus disorder prediction 289 318 - -
Aip07g01941 338 PANTHER GH16843P 1 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01941 Aip-Chr7 54062519 54066870 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01941 - - gmx:100780151 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01941 07 54062519 54066870 Aip07g01941 07 54062519 54066870 ECH
Aip07g01941 07 54062519 54066870 Aip07g01941 07 54062519 54066870 PCT