Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01926 ATGTCTGCGCTGCTACTTTCCATGATGGTTTCATCCACCACTGCTTTCGGTCTTCGCAAGAGGGATGATTCCCCCCAGAATGTGACTTACGATGGCAGGTCCCTCTTCATCAACGGCAGACGGGAGCTCCTCTTCTCTGGTTCCATCCACTACCCTCGTAGCACTCCTGACATGTGGCCTGATCTTCTTGACAAGGCAAGACATGGAGGCCTGAACACCATCCAGACCTACGTCTTCTGGAATCTCCATGAGCCAGAGAAAGGCAAGTTCAACTTTGAAGGGAACGCCGATCTTATTAAGTTCATTAAGCTCATTCAAGAGAGAGGGATGTATTTGATCCTAAGGCTGGGCCCTTTCATCCAAGCGGAATGGAATCATGGTGGGCTTCCATATTGGCTAAGAGATGTCCCTGGCATCTATTTCCGCTCTAACAATGAACCCTTCAAGTTGCACATGAAGGAATACGTGATGAGGATAGTACAAATGATGAAGGACAATAAGTTTTTTGCTTCCCAGGGAGGACCCATCATCTTGGCGCAGATCGAGAATGAGTACAACCAAATACAACTTGCTTACGACGAACGCGGCATAGAGTATGTGAACTGGGCGGCCCAGATGGCAGTGGAAACCAACATCGGAGTGCCGTGGATCATGTGCAAGCAGAAGGAAGCCCCTGATCCAGTTATCAATTCATGCAATGGAAGGCACTGTGGTGATACCTTCCTTGGACCCAACAAGCCATACAAACCCCGGGTCTGGACAGAGAACTGGACTGTCCAATACAGAGTGTATGGAGACCCTGTATCCAGGAGATCAGCAGAAGATATTGGCTTGTCCATGGCCCGCTTCTTCTCCAAGGACGGCAGTGTGGCCAACTACTACATGTATCATGGTGGAACCAACTTTGGAAGAAATGCCGCTGCTTTTAAAGTAACCGGTTATTACGATGCAGCGCCTCTCGATGAATACGGCATGACAAAGGAACCAAAATGGGGTCATCTTAGAGATGTCCACAGGGCTATCAACCTCTGTAAGAAGGCTCTAATTTATGGTACATCCACTACCCAAAAGTTAAATGAATTCCATGAGATTCGAGTCTATGAGAAACCCGGAACTCCCATCTGTGCTGCTTTCCTCTTTAATAACCACAGCACGGAAGCTGTCACTATTAACTTCAGAGGCAAGAATTTCTTTGTTCCTGGACACTCCATCAGCATTATCCCAGATTGCAAGAATGAGGTCCTCAACACTGACAATATCATTGCACAACACAATTATAGGACCTTCACGAGATCCAAACTCGCAAACAATCACGAGTGGGAGGTGTTCAGTGAGCCAATTCCAACTACCGCTGAAGTAGTGCCAGGTAACATGACAGCTCCTCCTGAGCTTTTCACCTTCCTTAAGGACACCACAGACTATGCATGGTACACCGTTAGCTTTGACTTCGACCCAGAAGACTTGCTCAAGAATGGAACACTCCCAAACCTTCATATCTTTAGTTTTGGACATGGATTGCTTGCATTCGTGAATGGAGAATACGTTGGATCTGGACACGGCACGAGCGAAAGAGCACAGTTTAAAATGCTAATAAAGGGTATAAATTTGAAGGCCGGGAAGAATGAGATATCCATCATGGCTTACGTAACTGGATTACACGATAGCGGAGCATACATGGAACACAGGTTTGCAGGACCGGCTGAAGTAAGGATCGACGGGCTGGAGACGAAAATGGGACATATTGAACTGGCAAAAAGAAGATTCAAATGGGGTGCCAGGGCTGGTCTGGAAGGGGAGAAGAAGGAGATATACACGGAGAAAGGGTCAAAGAAGGTGTCATGGGAGAAAGTGGGAGAGAAGGGAAGAGTAGGGCCTGCTTTATCATGGTACAAGACAAGATTCACAACTCCAGAGGGAAGGGAACCAGTGGCGATACGGATGACCGGCATGAAGAAGGGAATGATGTGGGTGAACGGCAATGGCCTTGGGCGTCACTGGGTGGACTACAAGGTACGTGGCACTGACGAGCCTAGCCAGGATGTATTCCACATCCCAAGATCCTTCCTCAACCCAAGGGACAACCTCCTTGTTATCTTTGAGGAAGAGCCATCCAACCCGGAGAACGTCCAGATCGAGCTCGTCTCCAGAGACACCGTCTGCAGCTACGTCCATGACTTCTTTGCGCCTGCTGTCCAGTCATGGAACGCCAAGCCCGGGGATGAGGAAGGAGAATTGCAGACCTCCGAGCCTCTCTCGAAGCCCCACGCTTCTGTCAAGTGCCCCAACAAGAAGAAGATCATCTCTGTTGACTTTGCAAGCTTCGGCAACCCATCCGGCGACTGTGGTTCCTTCCAGCTAGGCAACTGCACCTTTGATGCCGCCCTCACCAGGGACGTTGTCGAGAAGGCCTGCTTAGGAAAGGAGTTCTGCAAGCTTCCCGTCGACCCCGAACTCTTCGGCGCCGCCCCACGTGCTTGCTCTGCTCTTCCCTTTAAGACTATTGCAATCCAAGTCAAATGCTCCTATTAG 2529 0.4927 MSALLLSMMVSSTTAFGLRKRDDSPQNVTYDGRSLFINGRRELLFSGSIHYPRSTPDMWPDLLDKARHGGLNTIQTYVFWNLHEPEKGKFNFEGNADLIKFIKLIQERGMYLILRLGPFIQAEWNHGGLPYWLRDVPGIYFRSNNEPFKLHMKEYVMRIVQMMKDNKFFASQGGPIILAQIENEYNQIQLAYDERGIEYVNWAAQMAVETNIGVPWIMCKQKEAPDPVINSCNGRHCGDTFLGPNKPYKPRVWTENWTVQYRVYGDPVSRRSAEDIGLSMARFFSKDGSVANYYMYHGGTNFGRNAAAFKVTGYYDAAPLDEYGMTKEPKWGHLRDVHRAINLCKKALIYGTSTTQKLNEFHEIRVYEKPGTPICAAFLFNNHSTEAVTINFRGKNFFVPGHSISIIPDCKNEVLNTDNIIAQHNYRTFTRSKLANNHEWEVFSEPIPTTAEVVPGNMTAPPELFTFLKDTTDYAWYTVSFDFDPEDLLKNGTLPNLHIFSFGHGLLAFVNGEYVGSGHGTSERAQFKMLIKGINLKAGKNEISIMAYVTGLHDSGAYMEHRFAGPAEVRIDGLETKMGHIELAKRRFKWGARAGLEGEKKEIYTEKGSKKVSWEKVGEKGRVGPALSWYKTRFTTPEGREPVAIRMTGMKKGMMWVNGNGLGRHWVDYKVRGTDEPSQDVFHIPRSFLNPRDNLLVIFEEEPSNPENVQIELVSRDTVCSYVHDFFAPAVQSWNAKPGDEEGELQTSEPLSKPHASVKCPNKKKIISVDFASFGNPSGDCGSFQLGNCTFDAALTRDVVEKACLGKEFCKLPVDPELFGAAPRACSALPFKTIAIQVKCSY 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01926 842 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Aip07g01926 842 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Aip07g01926 842 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 625 639 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 PRINTS Glycosyl hydrolase family 35 signature 652 668 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 Gene3D Glycosidases 25 344 - -
Aip07g01926 842 Pfam Galactose binding lectin domain 759 840 IPR000922 GO:0030246
Aip07g01926 842 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 5 829 - -
Aip07g01926 842 Gene3D - 590 722 - -
Aip07g01926 842 ProSiteProfiles SUEL-type lectin domain profile. 750 841 IPR000922 GO:0030246
Aip07g01926 842 Gene3D - 745 842 IPR043159 -
Aip07g01926 842 SUPERFAMILY Galactose-binding domain-like 404 561 IPR008979 -
Aip07g01926 842 PANTHER BETA-GALACTOSIDASE RELATED 5 829 IPR001944 GO:0004553|GO:0005975
Aip07g01926 842 SUPERFAMILY Galactose-binding domain-like 587 737 IPR008979 -
Aip07g01926 842 Pfam Glycosyl hydrolases family 35 34 340 IPR031330 -
Aip07g01926 842 Pfam Beta-galactosidase jelly roll domain 617 698 IPR025300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01926 Aip-Chr7 51399713 51403193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01926 28 840 Glycoside Hydrolase AT2G16730 54.167 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01926 - - gmx:102663614 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01926 07 51399713 51403193 Aip07g01926 07 51399713 51403193 ECH